6ZSC

Human mitochondrial ribosome in complex with E-site tRNA


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like8053893 3002240 SCOP2B (2022-06-29)
L [auth A0]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8091481 3000334 SCOP2B (2022-06-29)
R [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063850 3001397 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins8075050 3001320 SCOP2B (2022-06-29)
Y [auth AI]SCOP2B SuperfamilyTranslational machinery components8098948 3000571 SCOP2B (2022-06-29)
Z [auth AJ]SCOP2B SuperfamilyNucleic acid-binding proteins8095431 3000135 SCOP2B (2022-06-29)
AA [auth AK]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052599 3000068 SCOP2B (2022-06-29)
GA [auth AQ]SCOP2B SuperfamilyRibosomal protein S218053089 3002159 SCOP2B (2022-06-29)
HA [auth AR]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like8051932 3002074 SCOP2B (2022-06-29)
OA [auth AY]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like8090914 3002471 SCOP2B (2022-06-29)
TA [auth XF]SCOP2B SuperfamilyRibosomal protein L48080706 3001146 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyRibosomal protein L368083324 3001346 SCOP2B (2022-06-29)
XA [auth XK]SCOP2B SuperfamilyRibosomal protein L138100460 3001134 SCOP2B (2022-06-29)
YA [auth XL]SCOP2B Superfamily50S Ribosomal protein L14-like8072072 3000433 SCOP2B (2022-06-29)
BB [auth XO]SCOP2B SuperfamilyProkaryotic ribosomal protein L178033689 3000995 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]KOG4080e6zsc01 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: KOG4080ECOD (1.6)
J [auth 9]MRP-L27e6zsc91 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: MRP-L27ECOD (1.6)
L [auth A0]MRP-S34e6zscA01 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: MRP-S34ECOD (1.6)
M [auth A1]F_UNCLASSIFIEDe6zscA11 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: F_UNCLASSIFIEDECOD (1.6)
N [auth A2]KOG4695e6zscA21 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: KOG4695ECOD (1.6)
O [auth A3]DUF1713e6zscA31 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: DUF1713ECOD (1.6)
R [auth AB]Ribosomal_S2_1e6zscAB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_1ECOD (1.6)
S [auth AC]MRP-S24e6zscAC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: MRP-S24ECOD (1.6)
B [auth 1]Ribosomal_L33e6zsc11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
T [auth AD]Ribosomal_S5_Ce6zscAD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
T [auth AD]Ribosomal_S5_1e6zscAD3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_1ECOD (1.6)
T [auth AD]KOG2646e6zscAD1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: KOG2646ECOD (1.6)
U [auth AE]Ribosomal_S6_1e6zscAE1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6_1ECOD (1.6)
V [auth AF]Ribosomal_S7e6zscAF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7ECOD (1.6)
W [auth AG]Ribosomal_S9e6zscAG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
X [auth AH]Ribosomal_S10_2e6zscAH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
Y [auth AI]Ribosomal_S11e6zscAI1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
Z [auth AJ]Ribosom_S12_S23e6zscAJ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
AA [auth AK]Ribosomal_S14_1e6zscAK1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
BA [auth AL]Ribosomal_S15_1e6zscAL1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
CA [auth AM]Ribosomal_S16e6zscAM1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
C [auth 2]Ribosomal_L34e6zsc21 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DA [auth AN]Ribosomal_S17_1e6zscAN1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
EA [auth AO]Ribosomal_S18e6zscAO1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
FA [auth AP]Ribosomal_S18e6zscAP1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
GA [auth AQ]Ribosomal_S21_2e6zscAQ1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21_2ECOD (1.6)
HA [auth AR]MRP-S22e6zscAR1 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: MRP-S22ECOD (1.6)
IA [auth AS]MRP-S23e6zscAS1 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: MRP-S23ECOD (1.6)
JA [auth AT]L51_S25_CI-B8e6zscAT1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
KA [auth AU]MRP-S26e6zscAU1 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: MRP-S26ECOD (1.6)
LA [auth AV]MRP-S27e6zscAV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: MRP-S27ECOD (1.6)
MA [auth AW]MRP-S35e6zscAW1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: MRP-S35ECOD (1.6)
D [auth 3]Ribosomal_L35pe6zsc31 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
NA [auth AX]DAP3_C,DAP3_Ne6zscAX1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DAP3_C,DAP3_NECOD (1.6)
OA [auth AY]MRP-S31e6zscAY1 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: MRP-S31ECOD (1.6)
PA [auth AZ]MRP-S33e6zscAZ1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: MRP-S33ECOD (1.6)
RA [auth XD]Ribosomal_L2e6zscXD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
RA [auth XD]Ribosomal_L2_Ce6zscXD2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
SA [auth XE]Ribosomal_L3e6zscXE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
TA [auth XF]Ribosomal_L4e6zscXF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
UA [auth XH]Ribosomal_L9_N_1e6zscXH1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_N_1ECOD (1.6)
WA [auth XJ]Ribosomal_L11e6zscXJ2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
WA [auth XJ]Ribosomal_L11_Ne6zscXJ1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
E [auth 4]Ribosomal_L36e6zsc41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
XA [auth XK]Ribosomal_L13e6zscXK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
YA [auth XL]Ribosomal_L14e6zscXL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
ZA [auth XM]Ribosomal_L27Ae6zscXM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
AB [auth XN]Ribosomal_L16e6zscXN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
BB [auth XO]Ribosomal_L17e6zscXO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17ECOD (1.6)
CB [auth XP]Ribosomal_L18pe6zscXP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
DB [auth XQ]Ribosomal_L19e6zscXQ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
EB [auth XR]Ribosomal_L20e6zscXR1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
FB [auth XS]Ribosomal_L21pe6zscXS1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
GB [auth XT]Ribosomal_L22e6zscXT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
F [auth 5]PDCD9e6zsc51 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
HB [auth XU]Ribosomal_L23_2e6zscXU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
IB [auth XV]ribosomal_L24_1e6zscXV1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
JB [auth XW]Ribosomal_L27e6zscXW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
KB [auth XX]Ribosomal_L28_1e6zscXX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28_1ECOD (1.6)
LB [auth XY]MRP-L47e6zscXY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: MRP-L47ECOD (1.6)
MB [auth XZ]Ribosomal_L30e6zscXZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
NB [auth a]MRP-S32e6zsca1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: MRP-S32ECOD (1.6)
OB [auth b]L51_S25_CI-B8e6zscb1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
PB [auth c]Ribonucleas_3_3e6zscc1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: Ribonucleas_3_3ECOD (1.6)
PB [auth c]dsrme6zscc2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: dsrmECOD (1.6)
QB [auth d]Tim44e6zscd1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: Tim44ECOD (1.6)
G [auth 6]PBPe6zsc61 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (1.6)
RB [auth e]MRP-L46e6zsce1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
SB [auth f]Ribosomal_S10_2e6zscf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
TB [auth g]Img2e6zscg1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
UB [auth h]Ribosomal_L50e6zsch1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: Ribosomal_L50ECOD (1.6)
VB [auth i]MRP-L51e6zsci1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: MRP-L51ECOD (1.6)
WB [auth j]EUF08791e6zscj1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: EUF08791ECOD (1.6)
XB [auth k]MRP_L53e6zsck1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
ZB [auth m]Mitoc_L55e6zscm1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Mitoc_L55ECOD (1.6)
AC [auth o]MRP-63e6zsco1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: MRP-63ECOD (1.6)
H [auth 7]TGSe6zsc72 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
H [auth 7]tRNA_SADe6zsc71 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: tRNA_SADECOD (1.6)
BC [auth p]RF-1_Ne6zscp1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
DC [auth r]Ribosomal_S18e6zscr1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
FC [auth s]PDCD9e6zscs1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
GC [auth t1]Ribosomal_L12_N_1e6zsct11 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
HC [auth t2]Ribosomal_L12_N_1e6zsct21 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
IC [auth t3]Ribosomal_L12_N_1e6zsct31 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
JC [auth t4]Ribosomal_L12_N_1e6zsct41 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
KC [auth t5]Ribosomal_L12_N_1e6zsct51 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
LC [auth t6]Ribosomal_L12_N_1e6zsct61 A: alpha duplicates or obligate multimersX: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology)T: Ribosomal protein L7/12, oligomerisation (N-terminal) domainF: Ribosomal_L12_N_1ECOD (1.6)
I [auth 8]MRP-L28e6zsc81 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: MRP-L28ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
J [auth 9]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
L [auth A0]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
M [auth A1]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
N [auth A2]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
O [auth A3]PF08213Mitochondrial mRNA-processing protein COX24, C-terminal (COX24_C)Mitochondrial mRNA-processing protein COX24, C-terminalThis domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is ...This domain of unknown function is found at the C terminal end of Mitochondrial small ribosomal subunit protein mS38, also known as Mitochondrial mRNA-processing protein COX24 in yeast which is involved in the splicing of the COX1 mRNA [1]. COX24 is a component of the mitochondrial ribosome (mitoribosome), responsible for the synthesis of mitochondrial genome-encoded proteins, including at least some of the essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are attached to the mitochondrial inner membrane and translation products are cotranslationally integrated into the membrane [2,3]. This domain is also found in COX24 mammalian homologue Aurora kinase A-interacting protein [4]. This entry also includes uncharacterised proteins from bacteria.
Domain
P [auth A4]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
P [auth A4]PF13041PPR repeat family (PPR_2)PPR repeat family- Repeat
R [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
S [auth AC]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
B [auth 1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
T [auth AD]PF2125140S ribosomal protein rpS2 (S5p), N-terminal (S5p_N)40S ribosomal protein rpS2 (S5p), N-terminalThis entry represents an extension found at the N-terminal of mammalian 28S ribosomal protein S5 [1,2]. This lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].Domain
T [auth AD]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
T [auth AD]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
U [auth AE]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
V [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
W [auth AG]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
X [auth AH]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
Y [auth AI]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
Z [auth AJ]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
AA [auth AK]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
BA [auth AL]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
CA [auth AM]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
C [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
DA [auth AN]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
EA [auth AO]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
FA [auth AP]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
GA [auth AQ]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
HA [auth AR]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
IA [auth AS]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
JA [auth AT]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
KA [auth AU]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
LA [auth AV]PF10037Mitochondrial 28S ribosomal protein S27 (MRP-S27)Mitochondrial 28S ribosomal protein S27- Repeat
MA [auth AW]PF10246Mitochondrial ribosomal protein MRP-S35 (MRP-S35)Mitochondrial ribosomal protein MRP-S35- Family
D [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
NA [auth AX]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
OA [auth AY]PF15433Mitochondrial 28S ribosomal protein S31 (MRP-S31)Mitochondrial 28S ribosomal protein S31- Family
PA [auth AZ]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
RA [auth XD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
RA [auth XD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
SA [auth XE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
TA [auth XF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
UA [auth XH]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
VA [auth XI]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
WA [auth XJ]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
WA [auth XJ]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
E [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
XA [auth XK]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
YA [auth XL]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
ZA [auth XM]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
AB [auth XN]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
BB [auth XO]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
CB [auth XP]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
DB [auth XQ]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
EB [auth XR]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
FB [auth XS]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
GB [auth XT]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
F [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
HB [auth XU]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
IB [auth XV]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
IB [auth XV]PF00467KOW motif (KOW)KOW motif- Family
JB [auth XW]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
KB [auth XX]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
LB [auth XY]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
MB [auth XZ]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
NB [auth a]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
OB [auth b]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
QB [auth d]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
G [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding protein- Domain
RB [auth e]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
SB [auth f]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
TB [auth g]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].Domain
UB [auth h]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
VB [auth i]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
WB [auth j]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family
XB [auth k]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
YB [auth l]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
ZB [auth m]PF09776Mitochondrial ribosomal protein L55 (Mitoc_L55)Mitochondrial ribosomal protein L55- Family
AC [auth o]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
CC [auth q]PF10147Growth arrest and DNA-damage-inducible proteins-interacting protein 1 (CR6_interact)Growth arrest and DNA-damage-inducible proteins-interacting protein 1- Family
DC [auth r]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
FC [auth s]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
PF16320Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N)Ribosomal protein L7/L12 dimerisation domainThis is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1].Domain
I [auth 8]PF09812Mitochondrial ribosomal protein L28 (MRP-L28)Mitochondrial ribosomal protein L28- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]39S ribosomal protein L32, mitochondrial
J [auth 9]39S ribosomal protein L41, mitochondrial
K [auth XA]16S mitochondrial rRNA---
L [auth A0]28S ribosomal protein S34, mitochondrial
M [auth A1]28S ribosomal protein S35, mitochondrial
N [auth A2]Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
O [auth A3]Aurora kinase A-interacting protein-
P [auth A4]Pentatricopeptide repeat domain-containing protein 3, mitochondrial
Q [auth AA]12S mitochondrial rRNA---
R [auth AB]28S ribosomal protein S2, mitochondrial
S [auth AC]28S ribosomal protein S24, mitochondrial
B [auth 1]39S ribosomal protein L33, mitochondrial
T [auth AD]28S ribosomal protein S5, mitochondrial
U [auth AE]28S ribosomal protein S6, mitochondrial
V [auth AF]28S ribosomal protein S7, mitochondrial
W [auth AG]28S ribosomal protein S9, mitochondrial
X [auth AH]28S ribosomal protein S10, mitochondrial-
Y [auth AI]28S ribosomal protein S11, mitochondrial
Z [auth AJ]28S ribosomal protein S12, mitochondrial
AA [auth AK]28S ribosomal protein S14, mitochondrial
BA [auth AL]28S ribosomal protein S15, mitochondrial
CA [auth AM]28S ribosomal protein S16, mitochondrial
C [auth 2]39S ribosomal protein L34, mitochondrial
DA [auth AN]28S ribosomal protein S17, mitochondrial
EA [auth AO]28S ribosomal protein S18b, mitochondrial
FA [auth AP]28S ribosomal protein S18c, mitochondrial
GA [auth AQ]28S ribosomal protein S21, mitochondrial
HA [auth AR]28S ribosomal protein S22, mitochondrial
IA [auth AS]28S ribosomal protein S23, mitochondrial
JA [auth AT]28S ribosomal protein S25, mitochondrial
KA [auth AU]28S ribosomal protein S26, mitochondrial
LA [auth AV]28S ribosomal protein S27, mitochondrial
MA [auth AW]28S ribosomal protein S28, mitochondrial
D [auth 3]39S ribosomal protein L35, mitochondrial
NA [auth AX]28S ribosomal protein S29, mitochondrial
OA [auth AY]28S ribosomal protein S31, mitochondrial
PA [auth AZ]28S ribosomal protein S33, mitochondrial
QA [auth XB]mitochondrial tRNAVal---
RA [auth XD]39S ribosomal protein L2, mitochondrial
SA [auth XE]39S ribosomal protein L3, mitochondrial
TA [auth XF]39S ribosomal protein L4, mitochondrial
UA [auth XH]39S ribosomal protein L9, mitochondrial
VA [auth XI]39S ribosomal protein L10, mitochondrial
WA [auth XJ]39S ribosomal protein L11, mitochondrial
E [auth 4]39S ribosomal protein L36, mitochondrial
XA [auth XK]39S ribosomal protein L13, mitochondrial
YA [auth XL]39S ribosomal protein L14, mitochondrial
ZA [auth XM]39S ribosomal protein L15, mitochondrial
AB [auth XN]39S ribosomal protein L16, mitochondrial
BB [auth XO]39S ribosomal protein L17, mitochondrial
CB [auth XP]39S ribosomal protein L18, mitochondrial
DB [auth XQ]39S ribosomal protein L19, mitochondrial
EB [auth XR]39S ribosomal protein L20, mitochondrial
FB [auth XS]39S ribosomal protein L21, mitochondrial
GB [auth XT]39S ribosomal protein L22, mitochondrial
F [auth 5]39S ribosomal protein L37, mitochondrial
HB [auth XU]39S ribosomal protein L23, mitochondrial
IB [auth XV]39S ribosomal protein L24, mitochondrial
JB [auth XW]39S ribosomal protein L27, mitochondrial
KB [auth XX]39S ribosomal protein L28, mitochondrial
LB [auth XY]39S ribosomal protein L47, mitochondrial
MB [auth XZ]39S ribosomal protein L30, mitochondrial
NB [auth a]39S ribosomal protein L42, mitochondrial
OB [auth b]39S ribosomal protein L43, mitochondrial
PB [auth c]39S ribosomal protein L44, mitochondrial
QB [auth d]39S ribosomal protein L45, mitochondrial
G [auth 6]39S ribosomal protein L38, mitochondrial-
RB [auth e]39S ribosomal protein L46, mitochondrial
SB [auth f]39S ribosomal protein L48, mitochondrial-
TB [auth g]39S ribosomal protein L49, mitochondrial
UB [auth h]39S ribosomal protein L50, mitochondrial-
VB [auth i]39S ribosomal protein L51, mitochondrial
WB [auth j]39S ribosomal protein L52, mitochondrial
XB [auth k]39S ribosomal protein L53, mitochondrial-
YB [auth l]39S ribosomal protein L54, mitochondrial
ZB [auth m]39S ribosomal protein L55, mitochondrial
AC [auth o]Ribosomal protein 63, mitochondrial
H [auth 7]39S ribosomal protein L39, mitochondrial
BC [auth p]Peptidyl-tRNA hydrolase ICT1, mitochondrial
CC [auth q]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
DC [auth r]39S ribosomal protein S18a, mitochondrial
EC [auth r4]E-site tRNA---
FC [auth s]39S ribosomal protein S30, mitochondrial
39S ribosomal protein L12, mitochondrial
MC [auth A]Quinupristin---
I [auth 8]39S ribosomal protein L40, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR002677Large ribosomal subunit protein bL32Family
A [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
J [auth 9]IPR019189Large ribosomal subunit protein mL41Family
L [auth A0]IPR032053Small ribosomal subunit protein mS34Family
M [auth A1]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
M [auth A1]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
N [auth A2]IPR010625CHCHDomain
N [auth A2]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
N [auth A2]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
O [auth A3]IPR013177Ribosomal protein mS38, C-terminalDomain
P [auth A4]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
P [auth A4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
P [auth A4]IPR002885Pentatricopeptide repeatRepeat
R [auth AB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
R [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
R [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
R [auth AB]IPR001865Small ribosomal subunit protein uS2Family
S [auth AC]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
B [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
B [auth 1]IPR001705Large ribosomal subunit protein bL33Family
T [auth AD]IPR000851Small ribosomal subunit protein uS5Family
T [auth AD]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
T [auth AD]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
T [auth AD]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
T [auth AD]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
T [auth AD]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
T [auth AD]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
U [auth AE]IPR000529Small ribosomal subunit protein bS6Family
U [auth AE]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
U [auth AE]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
V [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
V [auth AF]IPR000235Small ribosomal subunit protein uS7Family
V [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
W [auth AG]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
W [auth AG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
W [auth AG]IPR000754Small ribosomal subunit protein uS9Family
W [auth AG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
X [auth AH]IPR027486Small ribosomal subunit protein uS10 domainDomain
X [auth AH]IPR040055Small ribosomal subunit protein uS10mFamily
X [auth AH]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
Y [auth AI]IPR001971Small ribosomal subunit protein uS11Family
Y [auth AI]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Y [auth AI]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
Z [auth AJ]IPR006032Small ribosomal subunit protein uS12Family
Z [auth AJ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Z [auth AJ]IPR005679Ribosomal protein uS12, bacterial-typeFamily
AA [auth AK]IPR001209Small ribosomal subunit protein uS14Family
BA [auth AL]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
BA [auth AL]IPR000589Small ribosomal subunit protein uS15Family
BA [auth AL]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
CA [auth AM]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
CA [auth AM]IPR000307Small ribosomal subunit protein bS16Family
C [auth 2]IPR000271Large ribosomal subunit protein bL34Family
DA [auth AN]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
DA [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DA [auth AN]IPR000266Small ribosomal subunit protein uS17Family
EA [auth AO]IPR040054Small ribosomal subunit protein mS40Family
EA [auth AO]IPR001648Small ribosomal subunit protein bS18Family
EA [auth AO]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
FA [auth AP]IPR001648Small ribosomal subunit protein bS18Family
FA [auth AP]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
FA [auth AP]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
GA [auth AQ]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
GA [auth AQ]IPR001911Small ribosomal subunit protein bS21Family
HA [auth AR]IPR019374Small ribosomal subunit protein mS22Family
IA [auth AS]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
IA [auth AS]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
JA [auth AT]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
JA [auth AT]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
JA [auth AT]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
KA [auth AU]IPR026140Small ribosomal subunit protein mS26Family
LA [auth AV]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
LA [auth AV]IPR002885Pentatricopeptide repeatRepeat
LA [auth AV]IPR019266Small ribosomal subunit protein mS27Family
LA [auth AV]IPR034913mS27/PTCD2Family
MA [auth AW]IPR019375Small ribosomal subunit protein bS1mFamily
D [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
D [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
D [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
NA [auth AX]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
NA [auth AX]IPR019368Small ribosomal subunit protein mS29Family
NA [auth AX]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
OA [auth AY]IPR026299Mitochondrial 28S ribosomal protein S31Family
PA [auth AZ]IPR013219Small ribosomal subunit protein mS33Family
RA [auth XD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
RA [auth XD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth XD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth XD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
RA [auth XD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
RA [auth XD]IPR002171Large ribosomal subunit protein uL2Family
SA [auth XE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
SA [auth XE]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
SA [auth XE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
SA [auth XE]IPR000597Large ribosomal subunit protein uL3Family
TA [auth XF]IPR013005Large ribosomal subunit protein uL4-likeFamily
TA [auth XF]IPR002136Large ribosomal subunit protein uL4Family
TA [auth XF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
UA [auth XH]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
UA [auth XH]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
UA [auth XH]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
UA [auth XH]IPR000244Large ribosomal subunit protein bL9Family
VA [auth XI]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
VA [auth XI]IPR001790Large ribosomal subunit protein uL10Family
VA [auth XI]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
WA [auth XJ]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
WA [auth XJ]IPR000911Ribosomal protein uL11Family
WA [auth XJ]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
WA [auth XJ]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
WA [auth XJ]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
WA [auth XJ]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
E [auth 4]IPR000473Large ribosomal subunit protein bL36Family
E [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
XA [auth XK]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
XA [auth XK]IPR005822Large ribosomal subunit protein uL13Family
XA [auth XK]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
XA [auth XK]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
YA [auth XL]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
YA [auth XL]IPR000218Large ribosomal subunit protein uL14Family
ZA [auth XM]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
ZA [auth XM]IPR021131Large ribosomal subunit protein uL15/eL18Domain
ZA [auth XM]IPR030878Large ribosomal subunit protein uL15Family
ZA [auth XM]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AB [auth XN]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
AB [auth XN]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
AB [auth XN]IPR016180Large ribosomal subunit protein uL16 domainDomain
AB [auth XN]IPR047873Large ribosomal subunit protein uL16Family
BB [auth XO]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
BB [auth XO]IPR000456Large ribosomal subunit protein bL17Family
CB [auth XP]IPR005484Large ribosomal subunit protein uL18Family
CB [auth XP]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
DB [auth XQ]IPR001857Large ribosomal subunit protein bL19Family
DB [auth XQ]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
DB [auth XQ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
EB [auth XR]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
EB [auth XR]IPR005813Large ribosomal subunit protein bL20Family
FB [auth XS]IPR028909Large ribosomal subunit protein bL21-likeFamily
FB [auth XS]IPR001787Large ribosomal subunit protein bL21Family
FB [auth XS]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
GB [auth XT]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
GB [auth XT]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
GB [auth XT]IPR001063Large ribosomal subunit protein uL22Family
F [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
HB [auth XU]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
HB [auth XU]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HB [auth XU]IPR013025Large ribosomal subunit protein uL23-likeFamily
IB [auth XV]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IB [auth XV]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IB [auth XV]IPR003256Large ribosomal subunit protein uL24Family
IB [auth XV]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IB [auth XV]IPR005824KOWDomain
IB [auth XV]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
JB [auth XW]IPR001684Large ribosomal subunit protein bL27Family
KB [auth XX]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
KB [auth XX]IPR026569Large ribosomal subunit protein bL28Family
KB [auth XX]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
LB [auth XY]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
LB [auth XY]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
MB [auth XZ]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
MB [auth XZ]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
MB [auth XZ]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
NB [auth a]IPR019346Large ribosomal subunit protein mL42Family
OB [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
OB [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
OB [auth b]IPR039927Large ribosomal subunit protein mL43Family
PB [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
PB [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
PB [auth c]IPR014720Double-stranded RNA-binding domainDomain
QB [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
QB [auth d]IPR007379Tim44-like domainDomain
G [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
G [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
G [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
RB [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
RB [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
RB [auth e]IPR040008Large ribosomal subunit protein mL46Family
RB [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
SB [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
SB [auth f]IPR027487Large ribosomal subunit protein mL48Family
SB [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
TB [auth g]IPR007740Large ribosomal subunit protein mL49Family
UB [auth h]IPR018305Large ribosomal subunit protein mL50Family
VB [auth i]IPR019373Large ribosomal subunit protein mL51Family
WB [auth j]IPR034596Large ribosomal subunit protein mL52Family
XB [auth k]IPR019716Large ribosomal subunit protein mL53Family
YB [auth l]IPR013870Large ribosomal subunit protein mL54Family
ZB [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
ZB [auth m]IPR018615Large ribosomal subunit protein mL55Family
AC [auth o]IPR016576Large ribosomal subunit protein mL63Family
H [auth 7]IPR012676TGS-likeHomologous Superfamily
H [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
H [auth 7]IPR004095TGSDomain
H [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
BC [auth p]IPR000352Peptide chain release factor class IDomain
CC [auth q]IPR018472Large ribosomal subunit protein mL64Family
CC [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
DC [auth r]IPR001648Small ribosomal subunit protein bS18Family
DC [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
FC [auth s]IPR039982Large ribosomal subunit protein mL65Family
FC [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
IPR000206Large ribosomal subunit protein bL12Family
I [auth 8]IPR019192Large ribosomal subunit protein mL40Family
I [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 0]PharosQ9BYC8
J [auth 9]PharosQ8IXM3
L [auth A0]PharosP82930
M [auth A1]PharosP82673
N [auth A2]PharosQ96BP2
O [auth A3]PharosQ9NWT8
P [auth A4]PharosQ96EY7
R [auth AB]PharosQ9Y399
B [auth 1]PharosO75394
T [auth AD]PharosP82675
U [auth AE]PharosP82932
V [auth AF]PharosQ9Y2R9
W [auth AG]PharosP82933
X [auth AH]PharosP82664
Y [auth AI]PharosP82912
Z [auth AJ]PharosO15235
AA [auth AK]PharosO60783
BA [auth AL]PharosP82914
CA [auth AM]PharosQ9Y3D3
C [auth 2]PharosQ9BQ48
DA [auth AN]PharosQ9Y2R5
EA [auth AO]PharosQ9Y676
FA [auth AP]PharosQ9Y3D5
GA [auth AQ]PharosP82921
HA [auth AR]PharosP82650
IA [auth AS]PharosQ9Y3D9
JA [auth AT]PharosP82663
LA [auth AV]PharosQ92552
MA [auth AW]PharosQ9Y2Q9
D [auth 3]PharosQ9NZE8
NA [auth AX]PharosP51398
OA [auth AY]PharosQ92665
PA [auth AZ]PharosQ9Y291
RA [auth XD]PharosQ5T653
SA [auth XE]PharosP09001
TA [auth XF]PharosQ9BYD3
UA [auth XH]PharosQ9BYD2
VA [auth XI]PharosQ7Z7H8
WA [auth XJ]PharosQ9Y3B7
E [auth 4]PharosQ9P0J6
XA [auth XK]PharosQ9BYD1
YA [auth XL]PharosQ6P1L8
ZA [auth XM]PharosQ9P015
AB [auth XN]PharosQ9NX20
BB [auth XO]PharosQ9NRX2
CB [auth XP]PharosQ9H0U6
DB [auth XQ]PharosP49406
EB [auth XR]PharosQ9BYC9
GB [auth XT]PharosQ9NWU5
F [auth 5]PharosQ9BZE1
HB [auth XU]PharosQ16540
IB [auth XV]PharosQ96A35
JB [auth XW]PharosQ9P0M9
KB [auth XX]PharosQ13084
LB [auth XY]PharosQ9HD33
MB [auth XZ]PharosQ8TCC3
NB [auth a]PharosQ9Y6G3
OB [auth b]PharosQ8N983
PB [auth c]PharosQ9H9J2
QB [auth d]PharosQ9BRJ2
SB [auth f]PharosQ96GC5
TB [auth g]PharosQ13405
UB [auth h]PharosQ8N5N7
VB [auth i]PharosQ4U2R6
WB [auth j]PharosQ86TS9
YB [auth l]PharosQ6P161
ZB [auth m]PharosQ7Z7F7
AC [auth o]PharosQ9BQC6
H [auth 7]PharosQ9NYK5
BC [auth p]PharosQ14197
CC [auth q]PharosQ8TAE8
DC [auth r]PharosQ9NVS2
FC [auth s]PharosQ9NP92
PharosP52815
I [auth 8]PharosQ9NQ50

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
EC [auth r4]P5P Parent Component: A

EC [auth r4]Y5P
MC [auth A]004
MC [auth A]DBB RESIDAA0112

PSI-MOD :  (2S,3S,2'R)-3-methyllanthionine MOD:00121
MC [auth A]MHT RESIDAA0112

MC [auth A]MHU Parent Component: PHE

RESIDAA0112

MC [auth A]MHV RESIDAA0112

MC [auth A]MHW RESIDAA0112