8YN

Pseudoisocytidine

Created:	2017-03-27
Last modified:	2019-05-07

Find Related PDB Entry
1 entries where 8YN is found in a polymer sequence

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	34
Chiral Atom Count	3
Bond Count	35
Aromatic Bond Count	0

2D diagram of 8YN

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	Pseudoisocytidine
Systematic Name (OpenEye OEToolkits)	[(2~{R},3~{S},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-pyrimidin-5-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₉ H₁₄ N₃ O₇ P
Molecular Weight	307.197
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	NC1=NC=C([CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2)C(=O)N1
SMILES	OpenEye OEToolkits	2.0.7	C1C(C(OC1C2=CN=C(NC2=O)N)COP(=O)(O)O)O
Canonical SMILES	CACTVS	3.385	NC1=NC=C([C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2)C(=O)N1
Canonical SMILES	OpenEye OEToolkits	2.0.7	C1[C@@H]([C@H](O[C@H]1C2=CN=C(NC2=O)N)COP(=O)(O)O)O
InChI	InChI	1.03	InChI=1S/C9H14N3O7P/c10-9-11-2-4(8(14)12-9)6-1-5(13)7(19-6)3-18-20(15,16)17/h2,5-7,13H,1,3H2,(H2,15,16,17)(H3,10,11,12,14)/t5-,6+,7+/m0/s1
InChIKey	InChI	1.03	LMPCXRMBUOVHQD-RRKCRQDMSA-N

Related Resource References

Resource Name	Reference
PubChem	138753110

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.