C42

3'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE

Created:	1998-01-28
Last modified:	2011-06-04

Find Related PDB Entry
18 entries where C42 is found in a polymer sequence

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	35
Chiral Atom Count	3
Bond Count	36
Aromatic Bond Count	0

2D diagram of C42

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	3'-AMINO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
Systematic Name (OpenEye OEToolkits)	[(2S,3S,5R)-3-amino-5-(4-amino-2-oxo-pyrimidin-1-yl)oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₉ H₁₅ N₄ O₆ P
Molecular Weight	306.212
Type	DNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	10.04	O=C1N=C(N)C=CN1C2OC(C(N)C2)COP(=O)(O)O
SMILES	CACTVS	3.341	N[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=CC(=NC2=O)N
SMILES	OpenEye OEToolkits	1.5.0	C1C(C(OC1N2C=CC(=NC2=O)N)COP(=O)(O)O)N
Canonical SMILES	CACTVS	3.341	N[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)N2C=CC(=NC2=O)N
Canonical SMILES	OpenEye OEToolkits	1.5.0	C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)COP(=O)(O)O)N
InChI	InChI	1.03	InChI=1S/C9H15N4O6P/c10-5-3-8(13-2-1-7(11)12-9(13)14)19-6(5)4-18-20(15,16)17/h1-2,5-6,8H,3-4,10H2,(H2,11,12,14)(H2,15,16,17)/t5-,6+,8+/m0/s1
InChIKey	InChI	1.03	DLMWQJIDSZFHEV-SHYZEUOFSA-N

Related Resource References

Resource Name	Reference
PubChem	49866749

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.