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GDP

GUANOSINE-5'-DIPHOSPHATE

GDP in polymers: 25 entries. Examples include: 3ZD4 3OXJ 4Q9Q

GDP as free ligands, exist in 990 entries. Example includes: 5IN4 1XJE 4M1O

Find related ligands: Stereoisomers Similar ligands Chemical Structure Search

View summary at Ligand Expo



Chemical Component Summary

NameGUANOSINE-5'-DIPHOSPHATE
Identifiers[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate
FormulaC10 H15 N5 O11 P2
Molecular Weight443.20 g/mol
TypeRNA LINKING
Isomeric SMILESNc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](CO[P@@](O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O
InChIInChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKeyQGWNDRXFNXRZMB-UUOKFMHZSA-N

Chemical Details

Formal Charge0
Atom Count43
Chiral Atom Count4
Chiral AtomsC1',C2',C3',C4'
Bond Count45
Aromatic Bond Count5
Leaving AtomsHO3'

Drug Info: DrugBank

DrugBank IDDB04315 Different stereochemistry
NameGuanosine-5'-Diphosphate
Groupsexperimental
DescriptionA guanine nucleotide containing two phosphate groups esterified to the sugar moiety. [PubChem]
CAS number146-91-8

Drug Targets

NameSequence SearchPharmacological ActionActions
GTPase DerMATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKT...unknown
Eukaryotic peptide chain release factor GTP-binding subunit ERF3AMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEM...unknown
Elongation factor GMAVKVEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAA...unknown
Guanine nucleotide-binding protein G(i) subunit alpha-1MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIV...unknown
GTP-binding protein SAR1bMSFIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRL...unknown
View More
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682