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Chemical Component Summary

NameGENETICIN
Identifiers(2R,3S,4R,5R,6S)-5-amino-6-[(1R,2S,3S,4R,6S)-4,6-diamino-3-[(2R,3R,4R,5R)-3,5-dihydroxy-5-methyl-4-methylamino-oxan-2-yl]oxy-2-hydroxy-cyclohexyl]oxy-2-(1-hydroxyethyl)oxane-3,4-diol
FormulaC20 H40 N4 O10
Molecular Weight496.55 g/mol
TypeNON-POLYMER
Isomeric SMILESCN[C@@H]1[C@@H](O)[C@@H](O[C@H]2[C@H](N)C[C@H](N)[C@@H](O[C@H]3O[C@H]([C@@H](C)O)[C@@H](O)[C@H](O)[C@H]3N)[C@@H]2O)OC[C@]1(C)O
InChIInChI=1S/C20H40N4O10/c1-6(25)14-11(27)10(26)9(23)18(32-14)33-15-7(21)4-8(22)16(12(15)28)34-19-13(29)17(24-3)20(2,30)5-31-19/h6-19,24-30H,4-5,21-23H2,1-3H3/t6-,7+,8-,9-,10-,11+,12+,13-,14-,15-,16+,17-,18-,19-,20+/m1/s1
InChIKeyBRZYSWJRSDMWLG-DJWUNRQOSA-N

Chemical Details

Formal Charge0
Atom Count74
Chiral Atom Count15
Chiral AtomsC11,C12,C13,C21,C23,C31,C32,C33,C41,C42,C43,C51,C52,C61,C62
Bond Count76
Aromatic Bond Count0
Leaving Atomsn/a

Drug Info: DrugBank

DrugBank IDDB04263 Different stereochemistry
NameGeneticin
Groupsexperimental
DescriptionGeneticin (also known as G418) is an aminoglycoside antibiotic similar in structure to gentamicin B1. It is produced by Micromonospora rhodorangea. Geneticin blocks polypeptide synthesis by inhibiting the elongation step in both prokaryotic and eukaryotic cells. Resistance to Geneticin is conferred by the neo gene from Tn5 encoding an aminoglycoside 3‘-phosphotransferase, APH 3‘ II. Geneticin is commonly used in laboratory research to select genetically engineered cells.
Categories
  • Amebicides
  • Aminoglycosides
  • Anti-Infective Agents
  • Antiparasitic Agents
  • Antiprotozoals
CAS number49863-47-0

Drug Targets

NameSequence SearchPharmacological ActionActions
Ornithine decarboxylaseMNNFGNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDILK...unknown
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682