this piece corresponds to the legacy myPDB login in the form of a bootstrap modal, will likely retire-->

SDG

2-amino-9-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-9H-purine-6-selenol

SDG is found in 2 entries

SDG in polymers: 2 entries. Examples include: 2R7Y 3TWH

Find related ligands: Stereoisomers Similar ligands Chemical Structure Search

View summary at Ligand Expo



Chemical Component Summary

Name2-amino-9-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)-9H-purine-6-selenol
Identifiers[(2R,3S,5R)-5-(2-amino-6-selanyl-purin-9-yl)-3-hydroxy-oxolan-2-yl]methyl dihydrogen phosphate
FormulaC10 H14 N5 O6 P Se
Molecular Weight410.18 g/mol
TypeDNA LINKING
Isomeric SMILESNc1nc([SeH])c2ncn([C@H]3C[C@H](O)[C@@H](COP(O)(O)=O)O3)c2n1
InChIInChI=1S/C10H14N5O6PSe/c11-10-13-8-7(9(23)14-10)12-3-15(8)6-1-4(16)5(21-6)2-20-22(17,18)19/h3-6,16H,1-2H2,(H2,17,18,19)(H3,11,13,14,23)/t4-,5+,6+/m0/s1
InChIKeyRNSTWFSCXYEWJZ-KVQBGUIXSA-N

Chemical Details

Formal Charge0
Atom Count37
Chiral Atom Count3
Chiral AtomsC1',C3',C4'
Bond Count39
Aromatic Bond Count10
Leaving AtomsO3P,HO3'