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Chemical Component Summary

NameVIRGINIAMYCIN M1
Identifiersn/a
FormulaC28 H35 N3 O7
Molecular Weight525.59 g/mol
TypeNON-POLYMER
Isomeric SMILESCC(C)[C@H]1OC(=O)C2=CCCN2C(=O)c2coc(CC(=O)C[C@H](O)\C=C(/C)\C=C\CNC(=O)\C=C\[C@H]1C)n2
InChIInChI=1S/C28H35N3O7/c1-17(2)26-19(4)9-10-24(34)29-11-5-7-18(3)13-20(32)14-21(33)15-25-30-22(16-37-25)27(35)31-12-6-8-23(31)28(36)38-26/h5,7-10,13,16-17,19-20,26,32H,6,11-12,14-15H2,1-4H3,(H,29,34)/b7-5+,10-9+,18-13+/t19-,20-,26-/m1/s1
InChIKeyDAIKHDNSXMZDCU-FQTGFAPKSA-N

Chemical Details

Formal Charge0
Atom Count73
Chiral Atom Count3
Chiral AtomsC17,C30,C32
Bond Count75
Aromatic Bond Count5
Leaving Atomsn/a

Drug Info: DrugBank

DrugBank IDDB01669 Different stereochemistry
NameVirginiamycin M1
Groupsexperimental
DescriptionPristinamycin IIA is a macrolide antibiotic. It is a member of the streptogramin A group of antibiotics and one component of pristinamycin (the other being pristinamycin IA). It is produced by Streptomyces graminofaciens and other bacteria.
Synonyms
  • Mikamycin A
  • Ostreogrycin A
  • Pristinamycin IIA
  • Streptogramin A
Affected OrganismBacteria
IndicationFor the treatment of bacterial infections.
Mechanism of actionVirginiamycin M1 is a macrocyclic lactone antibiotic that acts syngeristically with the structurally unrelated cyclic depsipeptides more commonly known as the virginiamycins B (ostreogrycin B or streptogramin B) and S to inhibit peptide elongation. This is achieved by blocking formation of a peptide bond between the growing peptide chain (peptidyl-tRNA) linked to the 50S ribosome and aminoacyl-tRNA. Virginiamycin M1 has proven to be highly active against Gram positive bacteria, particularly methicillin-resistant S. aureus.
Categories
  • Amino Acids, Peptides, and Proteins
  • Anti-Bacterial Agents
  • Anti-Infective Agents
  • Chemical Actions and Uses
  • Macrocyclic Compounds
CAS number21411-53-0

Drug Targets

NameSequence SearchPharmacological ActionActions
Streptogramin A acetyltransferaseMGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQI...unknown
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682