2W49

ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.5 of the entry. See complete history


Literature

Electron Tomography of Cryofixed, Isometrically Contracting Insect Flight Muscle Reveals Novel Actin-Myosin Interactions

Wu, S.Liu, J.Reedy, M.C.Tregear, R.T.Winkler, H.Franzini-Armstrong, C.Sasaki, H.Lucaveche, C.Goldman, Y.E.Reedy, M.K.Taylor, K.A.

(2010) PLoS One 5: 12643

  • DOI: https://doi.org/10.1371/journal.pone.0012643
  • Primary Citation of Related Structures:  
    2W49, 2W4A, 2W4G, 2W4T

  • PubMed Abstract: 

    Isometric muscle contraction, where force is generated without muscle shortening, is a molecular traffic jam in which the number of actin-attached motors is maximized and all states of motor action are trapped with consequently high heterogeneity. This heterogeneity is a major limitation to deciphering myosin conformational changes in situ. We used multivariate data analysis to group repeat segments in electron tomograms of isometrically contracting insect flight muscle, mechanically monitored, rapidly frozen, freeze substituted, and thin sectioned. Improved resolution reveals the helical arrangement of F-actin subunits in the thin filament enabling an atomic model to be built into the thin filament density independent of the myosin. Actin-myosin attachments can now be assigned as weak or strong by their motor domain orientation relative to actin. Myosin attachments were quantified everywhere along the thin filament including troponin. Strong binding myosin attachments are found on only four F-actin subunits, the "target zone", situated exactly midway between successive troponin complexes. They show an axial lever arm range of 77°/12.9 nm. The lever arm azimuthal range of strong binding attachments has a highly skewed, 127° range compared with X-ray crystallographic structures. Two types of weak actin attachments are described. One type, found exclusively in the target zone, appears to represent pre-working-stroke intermediates. The other, which contacts tropomyosin rather than actin, is positioned M-ward of the target zone, i.e. the position toward which thin filaments slide during shortening. We present a model for the weak to strong transition in the myosin ATPase cycle that incorporates azimuthal movements of the motor domain on actin. Stress/strain in the S2 domain may explain azimuthal lever arm changes in the strong binding attachments. The results support previous conclusions that the weak attachments preceding force generation are very different from strong binding attachments.


  • Organizational Affiliation

    Institute of Molecular Biophysics, Florida State University, Tallahassee, Florida, United States of America.


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
TROPONIN C, SKELETAL MUSCLEA [auth 0],
D [auth 3],
G [auth 6],
J [auth 9]
159Gallus gallusMutation(s): 0 
UniProt
Find proteins for P02588 (Gallus gallus)
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UniProt GroupP02588
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
TROPONIN T, FAST SKELETAL MUSCLE ISOFORMSB [auth 1],
E [auth 4],
H [auth 7],
IA [auth Y]
90Gallus gallusMutation(s): 0 
UniProt
Find proteins for P12620 (Gallus gallus)
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UniProt GroupP12620
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
TROPONIN I, FAST SKELETAL MUSCLEC [auth 2],
F [auth 5],
I [auth 8],
JA [auth Z]
141Gallus gallusMutation(s): 0 
UniProt
Find proteins for P68246 (Gallus gallus)
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UniProt GroupP68246
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  • Reference Sequence
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
TROPOMYOSIN ALPHA-1 CHAIN277Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for P58772 (Oryctolagus cuniculus)
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UniProt GroupP58772
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
ACTIN, ALPHA SKELETAL MUSCLE372Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for P68135 (Oryctolagus cuniculus)
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UniProt GroupP68135
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download Ideal Coordinates CCD File 
KA [auth 0]
LA [auth 0]
MA [auth 0]
NA [auth 0]
OA [auth 3]
KA [auth 0],
LA [auth 0],
MA [auth 0],
NA [auth 0],
OA [auth 3],
PA [auth 3],
QA [auth 3],
RA [auth 3],
SA [auth 6],
TA [auth 6],
UA [auth 6],
VA [auth 6],
WA [auth 9],
XA [auth 9],
YA [auth 9],
ZA [auth 9]
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONIMOD
RECONSTRUCTIONPROTOMO

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-05-05
    Type: Initial release
  • Version 1.1: 2011-05-08
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-08-23
    Changes: Data collection
  • Version 1.4: 2019-10-23
    Changes: Data collection, Other
  • Version 1.5: 2024-05-08
    Changes: Data collection, Database references, Derived calculations