4JUG
Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G
- PDB DOI: https://doi.org/10.2210/pdb4JUG/pdb
- Classification: VIRAL PROTEIN
- Organism(s): Influenza A virus (A/South Carolina/1/1918(H1N1))
- Expression System: Trichoplusia ni
- Mutation(s): Yes 
- Deposited: 2013-03-24 Released: 2013-05-01 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.267 
- R-Value Work: 0.207 
- R-Value Observed: 0.210 
wwPDB Validation   3D Report Full Report
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin | 324 | Influenza A virus (A/South Carolina/1/1918(H1N1)) | Mutation(s): 1  Gene Names: HA | ||
UniProt | |||||
Find proteins for Q9WFX3 (Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)) Explore Q9WFX3  Go to UniProtKB:  Q9WFX3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9WFX3 | ||||
Sequence AnnotationsExpand | |||||
|
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Hemagglutinin | 170 | Influenza A virus (A/South Carolina/1/1918(H1N1)) | Mutation(s): 0  Gene Names: HA | ||
UniProt | |||||
Find proteins for Q9WFX3 (Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)) Explore Q9WFX3  Go to UniProtKB:  Q9WFX3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9WFX3 | ||||
Sequence AnnotationsExpand | |||||
|
Oligosaccharides
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.267 
- R-Value Work: 0.207 
- R-Value Observed: 0.210 
- Space Group: P 3
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 120.856 | α = 90 |
b = 120.856 | β = 90 |
c = 235.724 | γ = 120 |
Software Name | Purpose |
---|---|
MAR345dtb | data collection |
PHASER | phasing |
PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
Entry History 
Deposition Data
Revision History (Full details and data files)
- Version 1.0: 2013-05-01
Type: Initial release - Version 1.1: 2013-08-07
Changes: Database references - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Structure summary - Version 2.1: 2023-11-08
Changes: Data collection, Database references, Refinement description, Structure summary