Sequence Similarity Clusters for the Entities in PDB 6RQJ

Entity #1 | Chains: A
Complement C5 protein, length: 999 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 18785
95 % 4 5 18178
90 % 4 5 17813
70 % 4 5 16601
50 % 4 5 14954
40 % 4 5 13897
30 % 4 5 12656
Entity #2 | Chains: C
Complement inhibitor protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 15098
95 % 8 8 8115
90 % 8 8 8057
70 % 8 8 7838
50 % 8 8 7385
40 % 8 8 7123
30 % 8 8 6684
Entity #3 | Chains: D
Rhipicephalus appendiculatus RaCI1 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 44403
95 % 2 2 39579
90 % 2 2 37763
70 % 2 2 33499
50 % 2 2 29128
40 % 3 3 20374
30 % 3 3 18272
Entity #4 | Chains: B
Complement C5 protein, length: 655 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 18364
95 % 4 5 17500
90 % 4 5 17172
70 % 4 5 16313
50 % 4 5 14904
40 % 4 5 13853
30 % 4 5 12453
Entity #5 | Chains: E
Putative 8.9 kDa family member protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23715
95 % 2 2 24592
90 % 2 2 22799
70 % 2 2 20885
50 % 2 2 18460
40 % 2 2 16983
30 % 2 2 15290

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures