6RQJ

Structure of human complement C5 complexed with tick inhibitors OmCI, RaCI1 and CirpT1


Sequence Similarity Clusters for the Entities in PDB 6RQJ

Entity #1 | Chains: A
Complement C5 protein, length: 999 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 20132
95 % 4 5 19385
90 % 4 5 18934
70 % 4 5 17531
50 % 4 5 15736
40 % 4 5 14580
30 % 4 5 13269
Entity #2 | Chains: C
Complement inhibitor protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 16104
95 % 8 8 8690
90 % 8 8 8650
70 % 8 8 8405
50 % 8 8 7902
40 % 8 8 7597
30 % 8 8 7133
Entity #3 | Chains: D
Rhipicephalus appendiculatus RaCI1 protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 46485
95 % 2 2 41901
90 % 2 2 39255
70 % 2 2 34714
50 % 2 2 30142
40 % 4 4 17298
30 % 4 4 15609
Entity #4 | Chains: B
Complement C5 protein, length: 655 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 19696
95 % 4 5 18679
90 % 4 5 18292
70 % 4 5 16573
50 % 4 5 16070
40 % 4 5 13837
30 % 4 5 13148
Entity #5 | Chains: E
Putative 8.9 kDa family member protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 31391
95 % 2 2 24911
90 % 2 2 24145
70 % 2 2 21992
50 % 2 2 19405
40 % 2 2 17788
30 % 2 2 16040

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures