Annotations: 1B35

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1b35a_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Picornaviridae-like VP (VP1, VP2, VP3 and VP4)	Insect picorna-like virus coat proteins	(Cricket paralysis virus ) [TaxId: 12136 ],	SCOPe (2.08)
B	d1b35b_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Picornaviridae-like VP (VP1, VP2, VP3 and VP4)	Insect picorna-like virus coat proteins	(Cricket paralysis virus ) [TaxId: 12136 ],	SCOPe (2.08)
C	d1b35.1	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Picornaviridae-like VP (VP1, VP2, VP3 and VP4)	Insect picorna-like virus coat proteins	(Cricket paralysis virus ) [TaxId: 12136 ],	SCOPe (2.08)
D	d1b35.1	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Picornaviridae-like VP (VP1, VP2, VP3 and VP4)	Insect picorna-like virus coat proteins	(Cricket paralysis virus ) [TaxId: 12136 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2 Family	Picornaviridae-like VP (VP1, VP2, VP3 and VP4)	8028446	4003466	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Positive stranded ssRNA viruses-like	8040825	3000918	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CRPV_capsid	e1b35A1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: CRPV_capsid	ECOD (1.6)
B	Rhv_4	e1b35B1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: Rhv_4	ECOD (1.6)
C	Rhv_3	e1b35C1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: Rhv_3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
D	4.10.690.10	Few Secondary Structures	Irregular	Cricket Paralysis Virus, Vp4	Chain D	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF08762	CRPV capsid protein like (CRPV_capsid)	CRPV capsid protein like	This is a family of capsid proteins found in positive stranded ssRNA viruses such as cricket paralysis virus (CRPV). It forms an all beta sheet structure [1].	Domain
B	PF00073	picornavirus capsid protein (Rhv)	picornavirus capsid protein	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.	Domain
C	PF00073	picornavirus capsid protein (Rhv)	picornavirus capsid protein	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...	CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.	Domain
D	PF11492	Cricket paralysis virus, VP4 (Dicistro_VP4)	Cricket paralysis virus, VP4	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	PROTEIN (CRICKET PARALYSIS VIRUS, VP1)	structural molecule activity	-	viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region
B	PROTEIN (CRICKET PARALYSIS VIRUS, VP2)	structural molecule activity	-	viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region
C	PROTEIN (CRICKET PARALYSIS VIRUS, VP3)	structural molecule activity	-	viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region
D	PROTEIN (CRICKET PARALYSIS VIRUS, VP4)	structural molecule activity	-	viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR014872	Dicistrovirus, capsid-polyprotein, C-terminal	Domain
A	IPR029053	Viral coat protein subunit	Homologous Superfamily
A	IPR001676	Picornavirus capsid	Domain
A	IPR033703	Picornavirus/Calicivirus coat protein	Domain
A	IPR024343	Capsid protein VP4, dicistrovirus	Domain
B	IPR014872	Dicistrovirus, capsid-polyprotein, C-terminal	Domain
B	IPR029053	Viral coat protein subunit	Homologous Superfamily
B	IPR001676	Picornavirus capsid	Domain
B	IPR033703	Picornavirus/Calicivirus coat protein	Domain
B	IPR024343	Capsid protein VP4, dicistrovirus	Domain
C	IPR014872	Dicistrovirus, capsid-polyprotein, C-terminal	Domain
C	IPR029053	Viral coat protein subunit	Homologous Superfamily
C	IPR001676	Picornavirus capsid	Domain
C	IPR033703	Picornavirus/Calicivirus coat protein	Domain
C	IPR024343	Capsid protein VP4, dicistrovirus	Domain
D	IPR014872	Dicistrovirus, capsid-polyprotein, C-terminal	Domain
D	IPR029053	Viral coat protein subunit	Homologous Superfamily
D	IPR001676	Picornavirus capsid	Domain
D	IPR033703	Picornavirus/Calicivirus coat protein	Domain
D	IPR024343	Capsid protein VP4, dicistrovirus	Domain