1DBG
CRYSTAL STRUCTURE OF CHONDROITINASE B
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1dbga_ | All beta proteins | Single-stranded right-handed beta-helix | Pectin lyase-like | Chondroitinase B | Chondroitinase B | (Pedobacter heparinus ) [TaxId: 984 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Chondroitinas_B | e1dbgA1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Pectin lyase-like (From Topology) | T: Pectin lyase-like | F: Chondroitinas_B | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.160.20.10 | Mainly Beta | 3 Solenoid | Pectate Lyase C-like | Single-stranded right-handed beta-helix, Pectin lyase-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14592 | Chondroitinase B (Chondroitinas_B) | Chondroitinase B | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
CHONDROITINASE B | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012334 | Pectin lyase fold | Homologous Superfamily | |
IPR039513 | PL-6 family | Family | |
IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily |