2IX8
MODEL FOR EEF3 BOUND TO AN 80S RIBOSOME
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ARM repeat-like | 8018516 | 3000116 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Chromo domain-like | 8018520 | 3000161 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | EF3A 4-helical bundle domain-like | 8056486 | 3002350 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8018510 | 3002020 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8018511 | 3002020 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG0062 | e2ix8A3 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: KOG0062 | ECOD (1.6) |
A | KOG1242 | e2ix8A4 | A: alpha arrays | X: Helical bundle domain in elongation factor 3A (From Topology) | H: Helical bundle domain in elongation factor 3A (From Topology) | T: Helical bundle domain in elongation factor 3A | F: KOG1242 | ECOD (1.6) |
A | KOG0213 | e2ix8A1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: KOG0213 | ECOD (1.6) |
A | ABC_tran | e2ix8A5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17947 | Four helical bundle domain (4HB) | Four helical bundle domain | This domain is found in elongation factor 3A where it packs against the bottom of the concave face of the HEAT domain [1]. | Domain | |
PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017871 | ABC transporter-like, conserved site | Conserved Site | |
IPR050611 | ATP-binding cassette sub-family F member, EF3 subfamily | Family | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR015688 | Elongation Factor 3, ABC2 domain, chromodomain-like insertion | Domain | |
IPR040533 | Elongation factor 3, four helical bundle domain | Domain | |
IPR047038 | Elongation Factor 3, chromodomain-like insertion superfamily | Homologous Superfamily | |
IPR003439 | ABC transporter-like, ATP-binding domain | Domain | |
IPR021133 | HEAT, type 2 | Repeat | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR047036 | Elongation factor 3, four helical bundle domain superfamily | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |