3DLL

The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
J [auth H]	d3dllh1	All beta proteins	Ribosomal protein L14	Ribosomal protein L14	Ribosomal protein L14	Ribosomal protein L14	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
K [auth I]	d3dlli1	Alpha and beta proteins (a/b)	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e	Ribosomal protein L15 (L15p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
L [auth J]	d3dllj1	Alpha and beta proteins (a+b)	alpha/beta-Hammerhead	Ribosomal protein L16p/L10e	Ribosomal protein L16p	Ribosomal protein L16p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
M [auth K]	d3dllk1	Alpha and beta proteins (a+b)	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
N [auth L]	d3dlll1	Alpha and beta proteins (a/b)	Ribonuclease H-like motif	Translational machinery components	Ribosomal protein L18 and S11	Ribosomal protein L18 (L18p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
O [auth M]	d3dllm1	All beta proteins	SH3-like barrel	Translation proteins SH3-like domain	Ribosomal protein L19	Ribosomal protein L19	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
P [auth N]	d3dlln1	All alpha proteins	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20	Ribosomal protein L20	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Q [auth O]	d3dllo1	All beta proteins	L21p-like	L21p-like	Ribosomal protein L21p	Ribosomal protein L21p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
R [auth P]	d3dllp1	Alpha and beta proteins (a+b)	Ribosomal protein L22	Ribosomal protein L22	Ribosomal protein L22	Ribosomal protein L22	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
S [auth Q]	d3dllq1	Alpha and beta proteins (a+b)	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e	L23p	Ribosomal protein L23	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
T [auth R]	d3dllr1	All beta proteins	SH3-like barrel	Translation proteins SH3-like domain	Ribosomal proteins L24p and L21e	Ribosomal proteins L24 (L24p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
U [auth S]	d3dlls1	All beta proteins	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein TL5 (general stress protein CTC)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
V [auth T]	d3dllt1	All beta proteins	Barrel-sandwich hybrid	Ribosomal L27 protein-like	Ribosomal L27 protein	Ribosomal protein L27	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
W [auth U]	d3dllu1	Alpha and beta proteins (a+b)	L28p-like	L28p-like	Ribosomal protein L28	Ribosomal protein L28 (L28p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
X [auth V]	d3dllv1	All alpha proteins	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Y [auth W]	d3dllw1	Alpha and beta proteins (a+b)	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Prokaryotic ribosomal protein L30	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
Z [auth Y]	d3dlly1	Small proteins	Rubredoxin-like	Zn-binding ribosomal proteins	Ribosomal protein L32p	Ribosomal protein L32p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
AA [auth 1]	d3dll11	Small proteins	Rubredoxin-like	Zn-binding ribosomal proteins	Ribosomal protein L33p	Ribosomal protein L33p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
BA [auth 2]	d3dll21	Peptides	Ribosomal protein L34p	Ribosomal protein L34p	Ribosomal protein L34p	Ribosomal protein L34p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
CA [auth 3]	d3dll31	Alpha and beta proteins (a+b)	L35p-like	L35p-like	Ribosomal protein L35p	Ribosomal protein L35p	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
DA [auth 4]	d3dll41	Small proteins	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
D [auth B]	d3dllb1	All beta proteins	Reductase/isomerase/elongation factor common domain	Translation proteins	Ribosomal protein L3	Ribosomal protein L3	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
E [auth C]	d3dllc1	Alpha and beta proteins (a/b)	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
F [auth D]	d3dlld1	Alpha and beta proteins (a+b)	RL5-like	RL5-like	Ribosomal protein L5	Ribosomal protein L5	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
G [auth E]	d3dlle1	Alpha and beta proteins (a+b)	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)
I [auth G]	d3dllg1	Alpha and beta proteins (a/b)	Ribosomal protein L13	Ribosomal protein L13	Ribosomal protein L13	Ribosomal protein L13	(Deinococcus radiodurans ) [TaxId: 1299 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J [auth H]	SCOP2B Superfamily	50S Ribosomal protein L14-like	8038558	3000433	SCOP2B (2022-06-29)
K [auth I]	SCOP2B Superfamily	Ribosomal proteins L15p and L18e	8038561	3001045	SCOP2B (2022-06-29)
L [auth J]	SCOP2B Superfamily	Ribosomal protein L16p/L10e	8038562	3000884	SCOP2B (2022-06-29)
M [auth K]	SCOP2B Superfamily	Prokaryotic ribosomal protein L17	8038564	3000995	SCOP2B (2022-06-29)
N [auth L]	SCOP2B Superfamily	Translational machinery components	8038566	3000571	SCOP2B (2022-06-29)
O [auth M]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8038569	3000334	SCOP2B (2022-06-29)
P [auth N]	SCOP2B Superfamily	Ribosomal protein L20	8038571	3000563	SCOP2B (2022-06-29)
Q [auth O]	SCOP2B Superfamily	l21p-like	8038572	3002005	SCOP2B (2022-06-29)
R [auth P]	SCOP2B Superfamily	Ribosomal protein L22	8038576	3001078	SCOP2B (2022-06-29)
S [auth Q]	SCOP2B Superfamily	Ribosomal proteins S24e, L23 and L15e	8038577	3000210	SCOP2B (2022-06-29)
T [auth R]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8038578	3000334	SCOP2B (2022-06-29)
U [auth S]	SCOP2B Superfamily	Ribosomal protein L25-like	8038580	3001161	SCOP2B (2022-06-29)
V [auth T]	SCOP2B Superfamily	Ribosomal L27 protein-like	8038582	3000539	SCOP2B (2022-06-29)
W [auth U]	SCOP2B Superfamily	L28p-like	8038585	3001966	SCOP2B (2022-06-29)
X [auth V]	SCOP2B Superfamily	Ribosomal protein L29 (L29p)	8038586	3000713	SCOP2B (2022-06-29)
Y [auth W]	SCOP2B Superfamily	Ribosomal protein L30p/L7e	8038590	3001378	SCOP2B (2022-06-29)
Z [auth Y]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8038593	3001320	SCOP2B (2022-06-29)
AA [auth 1]	SCOP2B Superfamily	Zn-binding ribosomal proteins	8038526	3001320	SCOP2B (2022-06-29)
CA [auth 3]	SCOP2B Superfamily	L35p-like	8038530	3000790	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8038534	3000334	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	Nucleic acid-binding proteins	8038538	3000135	SCOP2B (2022-06-29)
DA [auth 4]	SCOP2B Superfamily	Ribosomal protein L36	8038532	3001346	SCOP2B (2022-06-29)
D [auth B]	SCOP2B Superfamily	Translational proteins	8038543	3000811	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	Ribosomal protein L4	8038546	3001146	SCOP2B (2022-06-29)
F [auth D]	SCOP2B Superfamily	RL5-like	8038549	3001709	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Ribosomal protein L6	8038552	3000724	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Ribosomal protein L6	8038556	3000724	SCOP2B (2022-06-29)
H [auth F]	SCOP2B Superfamily	Ribosomal protein L11, C-terminal domain	8033402	3001186	SCOP2B (2022-06-29)
I [auth G]	SCOP2B Superfamily	Ribosomal protein L13	8038555	3001134	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth H]	Ribosomal_L14	e3dllH1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
K [auth I]	Ribosomal_L27A	e3dllI1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
L [auth J]	Ribosomal_L16	e3dllJ1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal protein L10e	F: Ribosomal_L16	ECOD (1.6)
M [auth K]	Ribosomal_L17_1	e3dllK1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Prokaryotic ribosomal protein L17 (From Topology)	T: Prokaryotic ribosomal protein L17	F: Ribosomal_L17_1	ECOD (1.6)
N [auth L]	Ribosomal_L18p	e3dllL1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L18p	ECOD (1.6)
O [auth M]	Ribosomal_L19	e3dllM1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L19	ECOD (1.6)
P [auth N]	Ribosomal_L20	e3dllN1	A: alpha arrays	X: PABP domain-like	H: Ribosomal protein L20 (From Topology)	T: Ribosomal protein L20	F: Ribosomal_L20	ECOD (1.6)
Q [auth O]	Ribosomal_L21p	e3dllO1	A: beta barrels	X: Ribosomal protein L21p (From Topology)	H: Ribosomal protein L21p (From Topology)	T: Ribosomal protein L21p	F: Ribosomal_L21p	ECOD (1.6)
R [auth P]	Ribosomal_L22	e3dllP1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
S [auth Q]	Ribosomal_L23_2	e3dllQ1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_2	ECOD (1.6)
T [auth R]	ribosomal_L24_1	e3dllR2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: ribosomal_L24_1	ECOD (1.6)
U [auth S]	Ribosomal_L25p	e3dllS1	A: beta barrels	X: Ribosomal protein L25-like	H: Ribosomal protein L25-like (From Topology)	T: Ribosomal protein L25-like	F: Ribosomal_L25p	ECOD (1.6)
U [auth S]	Ribosomal_TL5_C_1	e3dllS2	A: a+b complex topology	X: Ribosomal protein TL5/L25 C-terminal domain-like	H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)	T: Ribosomal protein TL5/L25 C-terminal domain-related	F: Ribosomal_TL5_C_1	ECOD (1.6)
V [auth T]	Ribosomal_L27	e3dllT1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Ribosomal L27 protein	F: Ribosomal_L27	ECOD (1.6)
W [auth U]	Ribosomal_L28	e3dllU1	A: few secondary structure elements	X: Ribosomal protein bL28-related (From Homology)	H: Ribosomal protein bL28-related	T: Ribosomal protein L28	F: Ribosomal_L28	ECOD (1.6)
X [auth V]	Ribosomal_L29	e3dllV1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29	ECOD (1.6)
Y [auth W]	Ribosomal_L30	e3dllW1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30	ECOD (1.6)
Z [auth Y]	Ribosomal_L32p	e3dllY1	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L32p	ECOD (1.6)
AA [auth 1]	Ribosomal_L33	e3dll11	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L33	ECOD (1.6)
BA [auth 2]	Ribosomal_L34	e3dll21	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
CA [auth 3]	Ribosomal_L35p	e3dll31	A: a+b two layers	X: Ribosomal protein L35p (From Topology)	H: Ribosomal protein L35p (From Topology)	T: Ribosomal protein L35p	F: Ribosomal_L35p	ECOD (1.6)
C [auth A]	Ribosomal_L2_1	e3dllA2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
C [auth A]	Ribosomal_L2_C_2	e3dllA1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C_2	ECOD (1.6)
DA [auth 4]	Ribosomal_L36	e3dll41	A: few secondary structure elements	X: Ribosomal protein L36 (From Topology)	H: Ribosomal protein L36 (From Topology)	T: Ribosomal protein L36	F: Ribosomal_L36	ECOD (1.6)
D [auth B]	Ribosomal_L3	e3dllB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
E [auth C]	Ribosomal_L4	e3dllC1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)
F [auth D]	Ribosomal_L5_C	e3dllD1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
G [auth E]	Ribosomal_L6	e3dllE1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
G [auth E]	Ribosomal_L6_1	e3dllE2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_1	ECOD (1.6)
H [auth F]	Ribosomal_L11	e3dllF1	A: alpha arrays	X: HTH	H: HTH	T: Ribosomal protein L11, C-terminal domain	F: Ribosomal_L11	ECOD (1.6)
I [auth G]	Ribosomal_L13	e3dllG1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J [auth H]	2.40.150.20	Mainly Beta	Beta Barrel	Ribosomal Protein L14	Ribosomal protein L14/L23	CATH (4.3.0)
L [auth J]	3.90.1170.10	Alpha Beta	Alpha-Beta Complex	Aldehyde Oxidoreductase	domain 3	CATH (4.3.0)
M [auth K]	3.90.1030.10	Alpha Beta	Alpha-Beta Complex	50s Ribosomal Protein L17	Chain: A,	CATH (4.3.0)
N [auth L]	3.30.420.100	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (4.3.0)
R [auth P]	3.90.470.10	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L22	Chain A	CATH (4.3.0)
S [auth Q]	3.30.70.330	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	RRM (RNA recognition motif) domain	CATH (4.3.0)
U [auth S]	2.40.240.10	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (4.3.0)
U [auth S]	2.170.120.20	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit	Chain A, domain 2	CATH (4.3.0)
Y [auth W]	3.30.1390.20	Alpha Beta	2-Layer Sandwich	Ribosomal Protein L30	Chain: A,	CATH (4.3.0)
C [auth A]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
C [auth A]	2.30.30.30	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
F [auth D]	3.30.1440.10	Alpha Beta	2-Layer Sandwich	50s Ribosomal Protein L5	Chain: A,	CATH (4.3.0)
G [auth E]	3.90.930.12	Alpha Beta	Alpha-Beta Complex	Outer Surface Protein A	domain 3	CATH (4.3.0)
H [auth F]	1.10.10.250	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Ribosomal protein L11/L12, C-terminal domain	CATH (4.3.0)
I [auth G]	3.90.1180.10	Alpha Beta	Alpha-Beta Complex	Ribosomal Protein L13p	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
J [auth H]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e	-	Domain
K [auth I]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	-	Family
M [auth K]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
O [auth M]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
P [auth N]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
R [auth P]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
S [auth Q]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
T [auth R]	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)	Ribosomal proteins 50S L24/mitochondrial 39S L24	-	Family
T [auth R]	PF00467	KOW motif (KOW)	KOW motif	-	Family
U [auth S]	PF14693	Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)	Ribosomal protein TL5, C-terminal domain	This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...	This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.	Domain
U [auth S]	PF01386	Ribosomal L25p family (Ribosomal_L25p)	Ribosomal L25p family	Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.	Domain
V [auth T]	PF01016	Ribosomal L27 protein (Ribosomal_L27)	Ribosomal L27 protein	-	Family
X [auth V]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
Y [auth W]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
Z [auth Y]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
AA [auth 1]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
BA [auth 2]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
CA [auth 3]	PF01632	Ribosomal protein L35 (Ribosomal_L35p)	Ribosomal protein L35	-	Family
C [auth A]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain	-	Domain
C [auth A]	PF00181	Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)	Ribosomal Proteins L2, RNA binding domain	-	Domain
DA [auth 4]	PF00444	Ribosomal protein L36 (Ribosomal_L36)	Ribosomal protein L36	-	Domain
D [auth B]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
E [auth C]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
F [auth D]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5	-	Domain
F [auth D]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
G [auth E]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6	-	Domain
H [auth F]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain	-	Domain
I [auth G]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth X]	rRNA-23S ribosomal RNA	-	-	-
J [auth H]	50S ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
K [auth I]	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth J]	50S ribosomal protein L16	RNA binding binding organic cyclic compound binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M [auth K]	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth L]	50S ribosomal protein L18	RNA binding binding organic cyclic compound binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth M]	50S ribosomal protein L19	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth N]	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth O]	50S ribosomal protein L21	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
R [auth P]	50S ribosomal protein L22	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
S [auth Q]	50S ribosomal protein L23	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
B [auth Z]	rRNA-5S ribosomal RNA	-	-	-
T [auth R]	50S ribosomal protein L24	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
U [auth S]	50S ribosomal protein L25	RNA binding binding organic cyclic compound binding rRNA binding 5S rRNA binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
V [auth T]	50S ribosomal protein L27	RNA binding binding organic cyclic compound binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W [auth U]	50S ribosomal protein L28	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
X [auth V]	50S ribosomal protein L29	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Y [auth W]	50S ribosomal protein L30	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Z [auth Y]	50S ribosomal protein L32	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding RNA binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure organelle ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
AA [auth 1]	50S ribosomal protein L33	RNA binding binding organic cyclic compound binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth 2]	50S ribosomal protein L34	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
CA [auth 3]	50S ribosomal protein L35	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth A]	50S ribosomal protein L2	RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
DA [auth 4]	50S ribosomal protein L36	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding RNA binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
D [auth B]	50S ribosomal protein L3	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
E [auth C]	50S ribosomal protein L4	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
F [auth D]	50S ribosomal protein L5	RNA binding binding organic cyclic compound binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
G [auth E]	50S ribosomal protein L6	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
H [auth F]	50S ribosomal protein L11	structural molecule activity structural constituent of ribosome RNA binding binding organic cyclic compound binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
I [auth G]	50S ribosomal protein L13	RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome rRNA binding	regulation of cellular process negative regulation of biological process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation regulation of cellular process negative regulation of biological process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
J [auth H]	IPR005745	Large ribosomal subunit protein uL14, bacterial-type	Family
J [auth H]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
J [auth H]	IPR000218	Large ribosomal subunit protein uL14	Family
J [auth H]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
K [auth I]	IPR005749	Large ribosomal subunit protein uL15, bacterial-type	Family
K [auth I]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
K [auth I]	IPR030878	Large ribosomal subunit protein uL15	Family
K [auth I]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
K [auth I]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
L [auth J]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
L [auth J]	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
L [auth J]	IPR000114	Large ribosomal subunit protein uL16, bacterial-type	Family
L [auth J]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
L [auth J]	IPR047873	Large ribosomal subunit protein uL16	Family
M [auth K]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
M [auth K]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
M [auth K]	IPR000456	Large ribosomal subunit protein bL17	Family
N [auth L]	IPR005484	Large ribosomal subunit protein uL18	Family
N [auth L]	IPR004389	Large ribosomal subunit protein uL18, bacterial-type	Family
O [auth M]	IPR001857	Large ribosomal subunit protein bL19	Family
O [auth M]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
O [auth M]	IPR018257	Large ribosomal subunit protein bL19, conserved site	Conserved Site
O [auth M]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
P [auth N]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
P [auth N]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
P [auth N]	IPR005813	Large ribosomal subunit protein bL20	Family
Q [auth O]	IPR028909	Large ribosomal subunit protein bL21-like	Family
Q [auth O]	IPR001787	Large ribosomal subunit protein bL21	Family
Q [auth O]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
R [auth P]	IPR047867	Large ribosomal subunit protein uL22, bacterial/organelle-type	Family
R [auth P]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
R [auth P]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
R [auth P]	IPR001063	Large ribosomal subunit protein uL22	Family
R [auth P]	IPR005727	Large ribosomal subunit protein uL22, bacterial/chloroplast-type	Family
S [auth Q]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
S [auth Q]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
S [auth Q]	IPR001014	Large ribosomal subunit protein uL23, conserved site	Conserved Site
S [auth Q]	IPR013025	Large ribosomal subunit protein uL23-like	Family
T [auth R]	IPR003256	Large ribosomal subunit protein uL24	Family
T [auth R]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
T [auth R]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
T [auth R]	IPR005824	KOW	Domain
T [auth R]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
T [auth R]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
U [auth S]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
U [auth S]	IPR001021	Ribosomal protein bL25, long-form	Family
U [auth S]	IPR029751	Large ribosomal subunit protein bL25, L25 domain	Domain
U [auth S]	IPR037121	Large ribosomal subunit protein bL25, C-terminal	Homologous Superfamily
U [auth S]	IPR020057	Large ribosomal subunit protein bL25, beta domain	Domain
U [auth S]	IPR020056	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal	Homologous Superfamily
U [auth S]	IPR050070	Bacterial ribosomal protein bL25	Family
V [auth T]	IPR001684	Large ribosomal subunit protein bL27	Family
V [auth T]	IPR018261	Large ribosomal subunit protein bL27, conserved site	Conserved Site
W [auth U]	IPR001383	Large ribosomal subunit protein bL28, bacterial-type	Family
W [auth U]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
W [auth U]	IPR050096	Bacterial ribosomal protein bL28	Family
W [auth U]	IPR026569	Large ribosomal subunit protein bL28	Family
W [auth U]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
X [auth V]	IPR050063	Universal ribosomal protein uL29	Family
X [auth V]	IPR001854	Large ribosomal subunit protein uL29	Family
X [auth V]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
X [auth V]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
Y [auth W]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
Y [auth W]	IPR005996	Large ribosomal subunit protein uL30, bacterial-type	Family
Y [auth W]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
Z [auth Y]	IPR002677	Large ribosomal subunit protein bL32	Family
Z [auth Y]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
Z [auth Y]	IPR044957	Large ribosomal subunit protein bL32, bacterial type	Family
AA [auth 1]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
AA [auth 1]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
AA [auth 1]	IPR001705	Large ribosomal subunit protein bL33	Family
AA [auth 1]	IPR018264	Large ribosomal subunit protein bL33, conserved site	Conserved Site
BA [auth 2]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
BA [auth 2]	IPR000271	Large ribosomal subunit protein bL34	Family
CA [auth 3]	IPR021137	Large ribosomal subunit protein bL35-like	Family
CA [auth 3]	IPR018265	Large ribosomal subunit protein bL35, conserved site	Conserved Site
CA [auth 3]	IPR001706	Large ribosomal subunit protein bL35	Family
CA [auth 3]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
C [auth A]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
C [auth A]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
C [auth A]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
C [auth A]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
C [auth A]	IPR005880	Large ribosomal subunit protein uL2, bacterial/organellar-type	Family
C [auth A]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C [auth A]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
C [auth A]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
C [auth A]	IPR002171	Large ribosomal subunit protein uL2	Family
DA [auth 4]	IPR000473	Large ribosomal subunit protein bL36	Family
DA [auth 4]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
D [auth B]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
D [auth B]	IPR019927	Large ribosomal subunit protein uL3, bacterial/organelle-type	Family
D [auth B]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
D [auth B]	IPR000597	Large ribosomal subunit protein uL3	Family
E [auth C]	IPR013005	Large ribosomal subunit protein uL4-like	Family
E [auth C]	IPR002136	Large ribosomal subunit protein uL4	Family
E [auth C]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
F [auth D]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
F [auth D]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
F [auth D]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
F [auth D]	IPR020930	Large ribosomal subunit protein uL5, bacterial-type	Family
F [auth D]	IPR002132	Large ribosomal subunit protein uL5	Family
G [auth E]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
G [auth E]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
G [auth E]	IPR000702	Large ribosomal subunit protein uL6-like	Family
G [auth E]	IPR019906	Large ribosomal subunit protein uL6, bacterial-type	Family
H [auth F]	IPR020785	Large ribosomal subunit protein uL11, conserved site	Conserved Site
H [auth F]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
H [auth F]	IPR000911	Ribosomal protein uL11	Family
H [auth F]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
H [auth F]	IPR006519	Large ribosomal subunit protein uL11, bacterial-type	Family
H [auth F]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
H [auth F]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
I [auth G]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
I [auth G]	IPR005822	Large ribosomal subunit protein uL13	Family
I [auth G]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
I [auth G]	IPR005823	Large ribosomal subunit protein uL13, bacterial-type	Family