17RA
BRANCHPOINT HELIX FROM YEAST AND BINDING SITE FOR PHAGE GA/MS2 COAT PROTEINS, NMR, 12 STRUCTURES
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D/3D NOESY | 10% H2O/90% D2O, 100% D2O | 20 mM | 6.8 | 1 atm | 298 | ||
2 | COSY | 10% H2O/90% D2O, 100% D2O | 20 mM | 6.8 | 1 atm | 298 | ||
3 | HETCOR | 10% H2O/90% D2O, 100% D2O | 20 mM | 6.8 | 1 atm | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX500 | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | LEAST RESTRAINT VIOLATION |
Conformers Calculated Total Number | 75 |
Conformers Submitted Total Number | 12 |
Additional NMR Experimental Information | |
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Details | FURTHER DETAILS OF DATA ACQUISITION AND STRUCTURE CALCULATION CAN BE FOUND IN THE METHODS SECTION OF THE MANUSCRIPT LISTED ABOVE. MODELS 1-6 ARE MINIMIZED STRUCTURES CALCULATED WITHOUT BASE PAIR CONSTRAINTS FOR A6, A7, AND U16. MODELS 7-12 ARE MINIMIZED STRUCTURES CALCULATED USING A6-U16 BASE PAIR CONSTRAINTS AND AN A7 N1H-U16 O2 HYDROGEN BOND. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.1 | BRUNGER |
2 | structure solution | Felix | 950 |