1G91
SOLUTION STRUCTURE OF MYELOID PROGENITOR INHIBITORY FACTOR-1 (MPIF-1)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 2 mM MPIF-1 U-13C,15N | 90% H2O, 10% D2O, pH 5.2 | 20 mM sodium acetate | 5.2 | ambient | 308 | |
2 | HNCACB | 2 mM MPIF-1 U-13C,15N | 90% H2O, 10% D2O, pH 5.2 | 20 mM sodium acetate | 5.2 | ambient | 308 | |
3 | CBCA(CO)NH | 2 mM MPIF-1 U-13C,15N | 90% H2O, 10% D2O, pH 5.2 | 20 mM sodium acetate | 5.2 | ambient | 308 | |
4 | HCCH-TOCSY | 2 mM MPIF-1 U-13C,15N | 90% H2O, 10% D2O, pH 5.2 | 20 mM sodium acetate | 5.2 | ambient | 308 | |
5 | 3D_15N-separated_NOESY | 2 mM MPIF-1 U-15N | 90% H2O, 10% D2O, pH 5.2 | |||||
6 | HNHA | 2 mM MPIF-1 U-15N | 90% H2O, 10% D2O, pH 5.2 | |||||
7 | 2D NOESY | 2 mM MPIF-1 | 99.99 % D2O, pH 5.2 | |||||
8 | DQF-COSY | 2 mM MPIF-1 | 99.99 % D2O, pH 5.2 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITY | 600 |
2 | Varian | INOVA | 500 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry, simulated annealing, molecular dynamics | The structures are based on a total of 711 NOE, 82 dihedral, and 36 H-bonding restraints | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 30 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR | 3.1 | Brunger |
2 | refinement | X-PLOR | 3.1 | Brunger |