1LKN
Solution NMR Structure of Protein TM_1112 from Thermotoga maritima. Ontario Centre for Structural Proteomics Target TM1112_1_89; Northeast Structural Genomics Consortium Target VT74.
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C/15N-separated_NOESY | 1mM tm1112 U-15N,13C; 25mM phosphate buffer NA; 95% H2O, 5% D2O | 95% H2O/5% D2O | 20uM Zn2+ | 6.5 | ambient | 298 | |
2 | 3D_15N/15N-separated_NOESY | 1mM tm1112 U-15N,13C; 25mM phosphate buffer NA; 95% H2O, 5% D2O | 95% H2O/5% D2O | 20uM Zn2+ | 6.5 | ambient | 298 | |
3 | HNHA | 1mM tm1112 U-15N,13C; 25mM phosphate buffer NA; 95% H2O, 5% D2O | 95% H2O/5% D2O | 20uM Zn2+ | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
2 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | The structures are based on a total of 2619 restraints, in which 2508 are NOE-derived distance constraints, 111 are dihedral angle restraints from TALOS analysis and HNHA experiment. | NMRPipe |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted,back calculated data agree with experimental NOESY spectrum,structures with the lowest energy |
Conformers Calculated Total Number | 30 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 2.1 | F. Delaglio |
2 | data analysis | Sparky | SPARKY 3 | T. D. Goddard and D. G. Kneller |
3 | structure solution | ARIA BASED ON XPLOR3.851 | M. NILGES, A.T. Brunger | |
4 | refinement | ARIA BASED ON XPLOR3.851 | M. NILGES, A.T. Brunger |