1TE7
Solution NMR Structure of Protein yqfB from Escherichia coli. Northeast Structural Genomics Consortium Target ET99
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | GFT (4,3)D HNNCABCA | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
2 | GFT (4,3)D CABCA(CO)NHN | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
3 | GFT (5,2)D HACACONHN | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
4 | GFT (4,3)D HCCH COSY | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 | ||||
5 | 3D 15N,13Caliphatic,13Caromatic-resolved [1H,1H]-NOESY | 1mM U-13C,15N YqfB,25 mM Na phosphate, 400 mM NaCl, 1 mM DTT, 20 mM ZnCl2, 0.01% NaN3, 90% H2O, 10% D2O | 90% H2O/10% D2O | 6.5 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics with DYANA | PROSA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations,lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | PROSA | 6 | Guentert |
2 | data analysis | XEASY | 1 | Bartels, C |
3 | data analysis | AutoAssign | 1 | Moseley, H.N.M. |
4 | refinement | DYANA | 5 | Guentert, P. |