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Solution structure of the peptidoglycan binding domain of B. subtilis cell wall lytic enzyme CwlC
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1.7mM CwlCr U-15N,13C 50mM phosphate buffer K; 100% D2O | 100% D2O | 70mM | 6.9 | ambient | 303 | |
2 | 3D_15N-separated_NOESY | 1.7mM CwlCr U-15N 50mM phosphate buffer K; 90% H2O, 10% D2O | 90% H2O/10% D2O | 70mM | 6.9 | ambient | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 800 |
2 | Bruker | AVANCE | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | NMRPipe |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 30 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | 2.3 | Delaglio, F. |
2 | data analysis | Sparky | 3.110 | Goddard, T.D. |
3 | structure solution | CYANA | 1.05 | Herrmann, T. |
4 | refinement | CNS | 1.1 |