Ligand validation:5UB5

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5UB5 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5UB5_UDP_A_404	91%	63%	0.1	0.989	0.58	0.82	-	2	0	0	100%	1
5L0T_UDP_A_404	99%	41%	0.059	0.991	0.86	1.44	2	5	0	0	100%	1
5L0V_UDP_A_1005	99%	34%	0.057	0.987	1.13	1.48	3	5	1	0	100%	1
5L0S_UDP_A_1004	97%	45%	0.07	0.988	0.87	1.23	1	3	0	0	100%	1
5L0R_UDP_A_403	97%	32%	0.071	0.988	1.19	1.52	3	5	0	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_D_702	100%	67%	0.032	0.995	0.59	0.69	-	-	0	0	100%	1
2B69_UDP_A_900	100%	42%	0.032	0.992	1.03	1.21	2	4	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.