NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5B2C designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5B2C_NAG_A_604Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5B2C_NAG_A_604Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5B2C_NAG_A_604Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5B2C_NAG_A_604 56% 41% 0.146 0.9181.05 1.24 2 200100%1
5B2C_NAG_A_602 50% 42% 0.152 0.9031.1 1.16 2 200100%1
5B2C_NAG_A_601 45% 36% 0.147 0.8781.08 1.43 2 200100%1
5B2C_NAG_B_604 42% 40% 0.16 0.8781.05 1.29 2 200100%1
5B2C_NAG_B_601 36% 37% 0.159 0.8531.06 1.41 2 300100%1
5B2C_NAG_B_602 35% 43% 0.194 0.881.09 1.11 2 100100%1
5B2C_NAG_B_603 24% 43% 0.232 0.861.09 1.13 2 200100%1
5B2C_NAG_A_603 20% 43% 0.263 0.8641.06 1.13 2 200100%1
6JJN_NAG_B_603 100% 87% 0.041 0.9830.25 0.44 - -00100%1
6JJM_NAG_B_603 99% 76% 0.047 0.9760.3 0.63 - -00100%1
5B2D_NAG_A_605 71% 39% 0.124 0.9451.05 1.31 2 100100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1