6J40

Structure of C2S2M2-type PSII-FCPII supercomplex from diatom

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
KA [auth o]	SCOP2B Superfamily	OMPA barrel-like	8095677	3000208	SCOP2B (2022-06-29)
M [auth O]	SCOP2B Superfamily	OMPA barrel-like	8095677	3000208	SCOP2B (2022-06-29)
MA [auth u]	SCOP2B Superfamily	PsbU/PolX domain-like	8094223	3000893	SCOP2B (2022-06-29)
O [auth U]	SCOP2B Superfamily	PsbU/PolX domain-like	8094223	3000893	SCOP2B (2022-06-29)
NA [auth v]	SCOP2B Superfamily	Cytochrome c	8094925	3000815	SCOP2B (2022-06-29)
P [auth V]	SCOP2B Superfamily	Cytochrome c	8094925	3000815	SCOP2B (2022-06-29)
EA [auth h]	SCOP2B Superfamily	Photosystem II 10 kDa phosphoprotein PsbH	8094731	3001547	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	Photosystem II 10 kDa phosphoprotein PsbH	8094731	3001547	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00124	e6j40A1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PF00124	ECOD (1.6)
Y [auth a]	PF00124	e6j40a1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PF00124	ECOD (1.6)
HA [auth k]	PF02533	e6j40k1	A: extended segments	X: Photosystem II reaction center protein K, PsbK (From Topology)	H: Photosystem II reaction center protein K, PsbK (From Topology)	T: Photosystem II reaction center protein K, PsbK	F: PF02533	ECOD (1.6)
J [auth K]	PF02533	e6j40K1	A: extended segments	X: Photosystem II reaction center protein K, PsbK (From Topology)	H: Photosystem II reaction center protein K, PsbK (From Topology)	T: Photosystem II reaction center protein K, PsbK	F: PF02533	ECOD (1.6)
IA [auth l]	PF02419	e6j40l1	A: extended segments	X: Photosystem II reaction center protein L, PsbL (From Topology)	H: Photosystem II reaction center protein L, PsbL (From Topology)	T: Photosystem II reaction center protein L, PsbL	F: PF02419	ECOD (1.6)
K [auth L]	PF02419	e6j40L1	A: extended segments	X: Photosystem II reaction center protein L, PsbL (From Topology)	H: Photosystem II reaction center protein L, PsbL (From Topology)	T: Photosystem II reaction center protein L, PsbL	F: PF02419	ECOD (1.6)
JA [auth m]	F_UNCLASSIFIED	e6j40m1	A: extended segments	X: Photosystem II reaction center protein M, PsbM (From Topology)	H: Photosystem II reaction center protein M, PsbM (From Topology)	T: Photosystem II reaction center protein M, PsbM	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth M]	F_UNCLASSIFIED	e6j40M1	A: extended segments	X: Photosystem II reaction center protein M, PsbM (From Topology)	H: Photosystem II reaction center protein M, PsbM (From Topology)	T: Photosystem II reaction center protein M, PsbM	F: F_UNCLASSIFIED	ECOD (1.6)
KA [auth o]	PF01716	e6j40o1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: PF01716	ECOD (1.6)
M [auth O]	PF01716	e6j40O1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: PF01716	ECOD (1.6)
LA [auth t]	PF01405	e6j40t1	A: extended segments	X: Photosystem II reaction center protein T, PsbT (From Topology)	H: Photosystem II reaction center protein T, PsbT (From Topology)	T: Photosystem II reaction center protein T, PsbT	F: PF01405	ECOD (1.6)
N [auth T]	PF01405	e6j40T1	A: extended segments	X: Photosystem II reaction center protein T, PsbT (From Topology)	H: Photosystem II reaction center protein T, PsbT (From Topology)	T: Photosystem II reaction center protein T, PsbT	F: PF01405	ECOD (1.6)
MA [auth u]	PF06514	e6j40u1	A: alpha arrays	X: HhH/H2TH	H: SAM/DNA-glycosylase	T: SAM domain-like	F: PF06514	ECOD (1.6)
O [auth U]	PF06514	e6j40U1	A: alpha arrays	X: HhH/H2TH	H: SAM/DNA-glycosylase	T: SAM domain-like	F: PF06514	ECOD (1.6)
NA [auth v]	PF14495	e6j40v1	A: alpha arrays	X: Cytochrome c-like	H: Cytochrome c (From Topology)	T: Cytochrome c	F: PF14495	ECOD (1.6)
P [auth V]	PF14495	e6j40V1	A: alpha arrays	X: Cytochrome c-like	H: Cytochrome c (From Topology)	T: Cytochrome c	F: PF14495	ECOD (1.6)
OA [auth y]	PF05969	e6j40y1	A: extended segments	X: Photosystem II reaction center protein ycf12 (From Topology)	H: Photosystem II reaction center protein ycf12 (From Topology)	T: Photosystem II reaction center protein ycf12	F: PF05969	ECOD (1.6)
Q [auth Y]	PF05969	e6j40Y1	A: extended segments	X: Photosystem II reaction center protein ycf12 (From Topology)	H: Photosystem II reaction center protein ycf12 (From Topology)	T: Photosystem II reaction center protein ycf12	F: PF05969	ECOD (1.6)
PA [auth x]	PF06596	e6j40x1	A: extended segments	X: Photosystem II PsbX protein (From Topology)	H: Photosystem II PsbX protein (From Topology)	T: Photosystem II PsbX protein	F: PF06596	ECOD (1.6)
R [auth X]	PF06596	e6j40X1	A: extended segments	X: Photosystem II PsbX protein (From Topology)	H: Photosystem II PsbX protein (From Topology)	T: Photosystem II PsbX protein	F: PF06596	ECOD (1.6)
QA [auth z]	PF01737	e6j40z1	A: extended segments	X: PsbZ-like (From Topology)	H: PsbZ-like (From Topology)	T: PsbZ-like	F: PF01737	ECOD (1.6)
S [auth Z]	PF01737	e6j40Z1	A: extended segments	X: PsbZ-like (From Topology)	H: PsbZ-like (From Topology)	T: PsbZ-like	F: PF01737	ECOD (1.6)
B	PF00421	e6j40B2	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PF00421	ECOD (1.6)
B	PF00421	e6j40B1	A: a+b two layers	X: Photosystem II antenna protein PsbB insertion domain (From Topology)	H: Photosystem II antenna protein PsbB insertion domain (From Topology)	T: Photosystem II antenna protein PsbB insertion domain	F: PF00421	ECOD (1.6)
Z [auth b]	PF00421	e6j40b1	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PF00421	ECOD (1.6)
Z [auth b]	PF00421	e6j40b2	A: a+b two layers	X: Photosystem II antenna protein PsbB insertion domain (From Topology)	H: Photosystem II antenna protein PsbB insertion domain (From Topology)	T: Photosystem II antenna protein PsbB insertion domain	F: PF00421	ECOD (1.6)
RA [auth q]	F_UNCLASSIFIED	e6j40q1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Oxygen-evolving enhancer protein 3 (From Topology)	T: Oxygen-evolving enhancer protein 3	F: F_UNCLASSIFIED	ECOD (1.6)
T [auth Q]	F_UNCLASSIFIED	e6j40Q1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Oxygen-evolving enhancer protein 3 (From Topology)	T: Oxygen-evolving enhancer protein 3	F: F_UNCLASSIFIED	ECOD (1.6)
SA [auth w]	F_UNCLASSIFIED	e6j40w1	A: extended segments	X: Photosystem II reaction center W protein, chloroplastic (From Topology)	H: Photosystem II reaction center W protein, chloroplastic (From Topology)	T: Photosystem II reaction center W protein, chloroplastic	F: F_UNCLASSIFIED	ECOD (1.6)
U [auth W]	F_UNCLASSIFIED	e6j40W1	A: extended segments	X: Photosystem II reaction center W protein, chloroplastic (From Topology)	H: Photosystem II reaction center W protein, chloroplastic (From Topology)	T: Photosystem II reaction center W protein, chloroplastic	F: F_UNCLASSIFIED	ECOD (1.6)
AB [auth 15]	PF00504	e6j40151	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
BB [auth 16]	PF00504	e6j40161	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
CB [auth 17]	PF00504	e6j40171	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
DB [auth 18]	PF00504	e6j40181	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
HB [auth 31]	PF00504	e6j40311	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
IB [auth 32]	PF00504	e6j40321	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
JB [auth 33]	PF00504	e6j40331	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
KB [auth 34]	PF00504	e6j40341	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
LB [auth 35]	PF00504	e6j40351	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
MB [auth 36]	PF00504	e6j40361	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
NB [auth 37]	PF00504	e6j40371	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
OB [auth 38]	PF00504	e6j40381	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
WA [auth 11]	PF00504	e6j40111	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
XA [auth 12]	PF00504	e6j40121	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
YA [auth 13]	PF00504	e6j40131	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
ZA [auth 14]	PF00504	e6j40141	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
AA [auth c]	PF00421	e6j40c1	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PF00421	ECOD (1.6)
C	PF00421	e6j40C1	A: alpha bundles	X: Photosystem II antenna protein-like (From Topology)	H: Photosystem II antenna protein-like (From Topology)	T: Photosystem II antenna protein-like	F: PF00421	ECOD (1.6)
BA [auth d]	PF00124	e6j40d1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PF00124	ECOD (1.6)
D	PF00124	e6j40D1	A: alpha bundles	X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)	T: Bacterial photosystem II reaction centre L and M subunits-like	F: PF00124	ECOD (1.6)
CA [auth e]	PF00283,PF00284	e6j40e1	A: extended segments	X: Cytochrome b559 subunits (From Topology)	H: Cytochrome b559 subunits (From Topology)	T: Cytochrome b559 subunits	F: PF00283,PF00284	ECOD (1.6)
E	PF00283,PF00284	e6j40E1	A: extended segments	X: Cytochrome b559 subunits (From Topology)	H: Cytochrome b559 subunits (From Topology)	T: Cytochrome b559 subunits	F: PF00283,PF00284	ECOD (1.6)
DA [auth f]	PF00283	e6j40f1	A: extended segments	X: Cytochrome b559 subunits (From Topology)	H: Cytochrome b559 subunits (From Topology)	T: Cytochrome b559 subunits	F: PF00283	ECOD (1.6)
F	PF00283	e6j40F1	A: extended segments	X: Cytochrome b559 subunits (From Topology)	H: Cytochrome b559 subunits (From Topology)	T: Cytochrome b559 subunits	F: PF00283	ECOD (1.6)
EA [auth h]	PF00737	e6j40h1	A: extended segments	X: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)	H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)	T: Photosystem II 10 kDa phosphoprotein PsbH	F: PF00737	ECOD (1.6)
G [auth H]	PF00737	e6j40H1	A: extended segments	X: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)	H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)	T: Photosystem II 10 kDa phosphoprotein PsbH	F: PF00737	ECOD (1.6)
FA [auth i]	PF02532	e6j40i1	A: extended segments	X: Photosystem II reaction center protein I, PsbI (From Topology)	H: Photosystem II reaction center protein I, PsbI (From Topology)	T: Photosystem II reaction center protein I, PsbI	F: PF02532	ECOD (1.6)
H [auth I]	PF02532	e6j40I1	A: extended segments	X: Photosystem II reaction center protein I, PsbI (From Topology)	H: Photosystem II reaction center protein I, PsbI (From Topology)	T: Photosystem II reaction center protein I, PsbI	F: PF02532	ECOD (1.6)
GA [auth j]	PF01788	e6j40j1	A: extended segments	X: Photosystem II reaction center protein J, PsbJ (From Topology)	H: Photosystem II reaction center protein J, PsbJ (From Topology)	T: Photosystem II reaction center protein J, PsbJ	F: PF01788	ECOD (1.6)
I [auth J]	PF01788	e6j40J1	A: extended segments	X: Photosystem II reaction center protein J, PsbJ (From Topology)	H: Photosystem II reaction center protein J, PsbJ (From Topology)	T: Photosystem II reaction center protein J, PsbJ	F: PF01788	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
KA [auth o], M [auth O]	PF01716	Manganese-stabilising protein / photosystem II polypeptide (MSP)	Manganese-stabilising protein / photosystem II polypeptide	-	Family
MA [auth u], O [auth U]	PF06514	Photosystem II 12 kDa extrinsic protein (PsbU) (PsbU)	Photosystem II 12 kDa extrinsic protein (PsbU)	-	Family
NA [auth v], P [auth V]	PF14495	Cytochrome c-550 domain (Cytochrom_C550)	Cytochrome c-550 domain	This domain is a heme binding cytochrome known as cytochrome c550, or cytochrome c549, or PsbV [1].	Domain
PA [auth x], R [auth X]	PF06596	Photosystem II reaction centre X protein (PsbX) (PsbX)	Photosystem II reaction centre X protein (PsbX)	-	Family
EA [auth h], G [auth H]	PF00737	Photosystem II 10 kDa phosphoprotein (PsbH)	Photosystem II 10 kDa phosphoprotein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, Y [auth a]	Photosystem II reaction center protein D1	-	-	-
HA [auth k], J [auth K]	Photosystem II reaction center protein K	-	-	-
IA [auth l], K [auth L]	Photosystem II reaction center protein L	-	-	-
JA [auth m], L [auth M]	Photosystem II reaction center protein M	-	-	-
KA [auth o], M [auth O]	Extrinsic protein in photosystem II	-	photosynthesis protein-containing complex organization photosynthesis, light reaction cellular metabolic process generation of precursor metabolites and energy photosystem II assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex assembly cellular process metabolic process cellular component organization or biogenesis regulation of biological process photosynthesis protein-containing complex organization photosynthesis, light reaction cellular metabolic process generation of precursor metabolites and energy photosystem II assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex assembly cellular process metabolic process cellular component organization or biogenesis regulation of biological process regulation of cellular process regulation of photosynthesis photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of cellular metabolic process regulation of generation of precursor metabolites and energy regulation of metabolic process	protein-containing complex photosystem intracellular anatomical structure catalytic complex photosystem II membrane membrane protein complex cellular anatomical entity thylakoid membrane photosystem II oxygen evolving complex intracellular organelle organelle intracellular non-membrane-bounded organelle oxidoreductase complex protein-containing complex photosystem intracellular anatomical structure catalytic complex photosystem II membrane membrane protein complex cellular anatomical entity thylakoid membrane photosystem II oxygen evolving complex intracellular organelle organelle intracellular non-membrane-bounded organelle oxidoreductase complex photosynthetic membrane thylakoid non-membrane-bounded organelle
LA [auth t], N [auth T]	Photosystem II reaction center protein T	-	-	-
MA [auth u], O [auth U]	Extrinsic protein in photosystem II	-	photosynthesis cellular metabolic process metabolic process cellular process regulation of biological process regulation of cellular process regulation of photosynthesis photosynthesis, light reaction photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of cellular metabolic process regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy photosynthesis cellular metabolic process metabolic process cellular process regulation of biological process regulation of cellular process regulation of photosynthesis photosynthesis, light reaction photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of cellular metabolic process regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy regulation of metabolic process	membrane cellular anatomical entity extrinsic component of membrane protein-containing complex photosystem intracellular anatomical structure catalytic complex photosystem II membrane protein complex thylakoid membrane photosystem II oxygen evolving complex intracellular organelle organelle intracellular non-membrane-bounded organelle membrane cellular anatomical entity extrinsic component of membrane protein-containing complex photosystem intracellular anatomical structure catalytic complex photosystem II membrane protein complex thylakoid membrane photosystem II oxygen evolving complex intracellular organelle organelle intracellular non-membrane-bounded organelle oxidoreductase complex photosynthetic membrane thylakoid non-membrane-bounded organelle
NA [auth v], P [auth V]	Cytochrome c-550	binding organic cyclic compound binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction cellular metabolic process metabolic process cellular process generation of precursor metabolites and energy cellular respiration energy derivation by oxidation of organic compounds respiratory electron transport chain electron transport chain	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
OA [auth y], Q [auth Y]	Photosystem II reaction center protein Ycf12	-	-	-
PA [auth x], R [auth X]	Photosystem II reaction center X protein	-	photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
QA [auth z], S [auth Z]	Photosystem II reaction center protein Z	-	-	-
B, Z [auth b]	Photosystem II chlorophyll protein CP47	-	-	-
RA [auth q], T [auth Q]	Extrinsic protein in photosystem II	-	-	intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle cellular anatomical entity thylakoid non-membrane-bounded organelle
SA [auth w], U [auth W]	Photosystem II reaction center protein W	-	-	-
TA [auth 5], V [auth 0]	Unknown protein 0	-	-	-
UA [auth 6], W [auth 1]	Unknown protein 1	-	-	-
VA [auth 7], X [auth 2]	Unknown protein 2	-	-	-
AB [auth 15], BB [auth 16], CB [auth 17], DB [auth 18], HB [auth 31], AB [auth 15], BB [auth 16], CB [auth 17], DB [auth 18], HB [auth 31], IB [auth 32], JB [auth 33], KB [auth 34], LB [auth 35], MB [auth 36], NB [auth 37], OB [auth 38], WA [auth 11], XA [auth 12], YA [auth 13], ZA [auth 14]	Fucoxanthin chlorophyll a/c-binding protein Lhcf1, FCP1	-	-	-
EB [auth 19], PB [auth 39]	Fucoxanthin chlorophyll a/c-binding protein monomer 1	-	-	-
FB [auth 20], QB [auth 40]	Fucoxanthin chlorophyll a/c-binding protein monomer 2	-	-	-
GB [auth 21], RB [auth 41]	Fucoxanthin chlorophyll a/c-binding protein monomer 3	-	-	-
AA [auth c], C	Photosystem II chlorophyll protein CP43	-	-	-
BA [auth d], D	Photosystem II reaction center protein D2	-	-	-
CA [auth e], E	Cytochrome b559 subunit alpha	-	-	-
DA [auth f], F	Cytochrome b559 subunit beta	-	-	-
EA [auth h], G [auth H]	Photosystem II reaction center protein H	ion binding binding anion binding phosphate ion binding small molecule binding	regulation of protein stability biological regulation regulation of biological quality protein stabilization photosynthesis cellular metabolic process metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle photosynthetic membrane thylakoid non-membrane-bounded organelle chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
FA [auth i], H [auth I]	Photosystem II reaction center protein I	-	-	-
GA [auth j], I [auth J]	Photosystem II reaction center protein J	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
KA [auth o], M [auth O]	IPR011250	Outer membrane protein/outer membrane enzyme PagP, beta-barrel	Homologous Superfamily
KA [auth o], M [auth O]	IPR002628	Photosystem II extrinsic protein O	Family
MA [auth u], O [auth U]	IPR010527	Photosystem II PsbU, oxygen evolving complex	Family
NA [auth v], P [auth V]	IPR017851	Photosystem II extrinsic protein V, cytochrome c-550 precursor	Family
NA [auth v], P [auth V]	IPR016003	Photosystem II extrinsic protein V, cytochrome c-550 precursor-like	Family
NA [auth v], P [auth V]	IPR036909	Cytochrome c-like domain superfamily	Homologous Superfamily
NA [auth v], P [auth V]	IPR009056	Cytochrome c-like domain	Domain
NA [auth v], P [auth V]	IPR029490	Cytochrome c-550 domain	Domain
PA [auth x], R [auth X]	IPR009518	Photosystem II PsbX	Family
PA [auth x], R [auth X]	IPR023431	Photosystem II PsbX, type 1 subfamily	Family
RA [auth q], T [auth Q]	IPR023222	PsbQ-like domain superfamily	Homologous Superfamily
EA [auth h], G [auth H]	IPR036863	Photosystem II reaction centre protein H superfamily	Homologous Superfamily
EA [auth h], G [auth H]	IPR001056	Photosystem II reaction centre protein H	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
EA [auth h], G [auth H], KA [auth o], M [auth O], MA [auth u] EA [auth h], G [auth H], KA [auth o], M [auth O], MA [auth u], NA [auth v], O [auth U], P [auth V], PA [auth x], R [auth X], RA [auth q], T [auth Q]	OPM	Transmembrane	Alpha-helical polytopic	Photosystems	Photosystem II