Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUNK_F_TYPEe6gzcA1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: UNK_F_TYPEECOD (1.6)
D [auth C]UNK_F_TYPEe6gzcC1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: UNK_F_TYPEECOD (1.6)
C [auth D]KOG0738e6gzcD1 A: alpha bundlesX: Spectrin repeat-likeH: MIT domain (From Topology)T: MIT domainF: KOG0738ECOD (1.6)
BKOG0738e6gzcB1 A: alpha bundlesX: Spectrin repeat-likeH: MIT domain (From Topology)T: MIT domainF: KOG0738ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth D]1.20.58.80 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (utative)
B1.20.58.80 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth C]
PF13925con80 domain of Katanin (Katanin_con80)con80 domain of KataninThe con80 domain of katanin is the C-terminal region of the protein that binds to the N-terminal domain of katanin-p60, the catalytic ATPase. The complex associates with a specific subregion of the mitotic spindle leading to increased microtubule dis ...The con80 domain of katanin is the C-terminal region of the protein that binds to the N-terminal domain of katanin-p60, the catalytic ATPase. The complex associates with a specific subregion of the mitotic spindle leading to increased microtubule disassembly and targeting of p60 to the spindle poles [1]. The assembly and function of the mitotic spindle requires the activity of a number of microtubule-binding proteins. Katanin, a heterodimeric microtubule-severing ATPase, is found localized at mitotic spindle poles. A proposed model is that katanin is targeted to spindle poles through a combination of direct microtubule binding by the p60 subunit and through interactions between the WD40 domain and an unknown protein [2].
Domain
B,
C [auth D]
PF21126Katanin p60 subunit A1, MIT domain (KATNA1_MIT)Katanin p60 subunit A1, MIT domainKatanin is an ATP-dependent microtubule severing protein composed of 60kDa (katanin-p60) and 80kDa (katanin-p80) subunits (KATNA1 and KATNB1, respectively) [1-4]. In mammals, there are two additional A-like subunits (KATNAL1 and KATNAL2) and one add ...Katanin is an ATP-dependent microtubule severing protein composed of 60kDa (katanin-p60) and 80kDa (katanin-p80) subunits (KATNA1 and KATNB1, respectively) [1-4]. In mammals, there are two additional A-like subunits (KATNAL1 and KATNAL2) and one additional B-like subunit (KATNBL1) [4]. KATNA1 has the enzymatic activity for microtubule severing and plays a key role in cytoskeletal reorganisation, while KATNB is the regulatory subunit. Formation of the katanin A/B heterodimer is mediated by the N-terminal Microtubule Interacting and Trafficking domain (MIT, represented in this entry) of KATNA1/KATNAL1) and a conserved C-terminal domain of KATNB [2]. This domain is organised in an antiparallel three-helix bundle [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
D [auth C]
Katanin p80 WD40 repeat-containing subunit B1
B,
C [auth D]
Katanin p60 ATPase-containing subunit A1