1B2H

Oligo-Peptide Binding Protein Complexed with Lysyl-Ornithyl-Lysine


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.5pH 5.5
Crystal Properties
Matthews coefficientSolvent content
2.4750.24

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 109.659α = 90
b = 76.124β = 90
c = 70.24γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray120 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODE

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.92098.50.08764.846360

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.9204399298.50.180.2228
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor14
p_planar_tor3.6
p_scangle_it2.353
p_mcangle_it1.766
p_scbond_it1.562
p_mcbond_it1.232
p_multtor_nbd0.247
p_singtor_nbd0.176
p_xyhbond_nbd0.128
p_plane_restr0.028
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor14
p_planar_tor3.6
p_scangle_it2.353
p_mcangle_it1.766
p_scbond_it1.562
p_mcbond_it1.232
p_multtor_nbd0.247
p_singtor_nbd0.176
p_xyhbond_nbd0.128
p_plane_restr0.028
p_angle_d0.027
p_bond_d0.01
p_angle_deg
p_planar_d
p_hb_or_metal_coord
p_chiral_restr
p_xhyhbond_nbd
p_orthonormal_tor
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4192
Nucleic Acid Atoms
Solvent Atoms376
Heterogen Atoms12

Software

Software
Software NamePurpose
DENZOdata reduction
SCALAdata scaling
REFMACrefinement
CCP4data scaling