X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1EVAPORATION6.527740% MPD, 5% PEG 8000, 0.1M Sodium Cacodylate, pH 6.5, EVAPORATION, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.7655.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 58.049α = 90
b = 99.329β = 90
c = 143.657γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315Mirror2007-12-21MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL7-11.0SSRLBL7-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.12599.94985149786
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.12.18100

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.1204674446714249999.940.191340.189330.22846RANDOM34.486
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.9-0.412.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.085
r_dihedral_angle_3_deg16.766
r_dihedral_angle_4_deg15.632
r_dihedral_angle_1_deg8.795
r_scangle_it5.378
r_mcangle_it4.752
r_mcbond_it4.306
r_scbond_it4.106
r_angle_refined_deg1.432
r_angle_other_deg0.921
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.085
r_dihedral_angle_3_deg16.766
r_dihedral_angle_4_deg15.632
r_dihedral_angle_1_deg8.795
r_scangle_it5.378
r_mcangle_it4.752
r_mcbond_it4.306
r_scbond_it4.106
r_angle_refined_deg1.432
r_angle_other_deg0.921
r_mcbond_other0.633
r_nbd_other0.206
r_nbd_refined0.186
r_symmetry_vdw_other0.183
r_nbtor_refined0.17
r_symmetry_hbond_refined0.166
r_symmetry_vdw_refined0.157
r_xyhbond_nbd_refined0.139
r_chiral_restr0.086
r_nbtor_other0.084
r_bond_refined_d0.011
r_bond_other_d0.007
r_gen_planes_refined0.004
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4981
Nucleic Acid Atoms
Solvent Atoms274
Heterogen Atoms19

Software

Software
Software NamePurpose
HKL-2000data collection
PHASERphasing
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling