X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.2645.68

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 145.61α = 90
b = 145.61β = 90
c = 145.61γ = 90
Symmetry
Space GroupP 21 3

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayPIXELPSI PILATUS 6MMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SASLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.443.94035840358

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.443.94034498199.90.24350.24230.2909RANDOM42.6526
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.843
r_dihedral_angle_4_deg15.304
r_dihedral_angle_3_deg13.272
r_dihedral_angle_1_deg4.24
r_angle_refined_deg0.818
r_scangle_it0.713
r_mcangle_it0.623
r_scbond_it0.424
r_mcbond_it0.354
r_nbtor_refined0.288
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.843
r_dihedral_angle_4_deg15.304
r_dihedral_angle_3_deg13.272
r_dihedral_angle_1_deg4.24
r_angle_refined_deg0.818
r_scangle_it0.713
r_mcangle_it0.623
r_scbond_it0.424
r_mcbond_it0.354
r_nbtor_refined0.288
r_nbd_refined0.159
r_symmetry_vdw_refined0.144
r_symmetry_hbond_refined0.113
r_xyhbond_nbd_refined0.104
r_chiral_restr0.05
r_bond_refined_d0.006
r_gen_planes_refined0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6429
Nucleic Acid Atoms
Solvent Atoms95
Heterogen Atoms82

Software

Software
Software NamePurpose
XSCALEdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction