X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP5.52930.1 M Bis-Tris, 25% w/v PEG3350, pH 5.5
Crystal Properties
Matthews coefficientSolvent content
2.0840.75

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 63.423α = 91.51
b = 63.491β = 112.63
c = 81.991γ = 115.44
Symmetry
Space GroupP 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315MIRRORS2013-08-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X29A1.075NSLSX29A

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.9573.6592.50.0589.51.970797-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.952.0275.50.33721.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.9473.6567215354592.110.179890.17680.23848RANDOM24.808
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.150.250.15-0.550.150.05
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.323
r_dihedral_angle_4_deg20.002
r_dihedral_angle_3_deg14.514
r_long_range_B_refined7.578
r_long_range_B_other7.541
r_dihedral_angle_1_deg6.122
r_scangle_other5.238
r_mcangle_it3.309
r_mcangle_other3.309
r_scbond_other3.258
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.323
r_dihedral_angle_4_deg20.002
r_dihedral_angle_3_deg14.514
r_long_range_B_refined7.578
r_long_range_B_other7.541
r_dihedral_angle_1_deg6.122
r_scangle_other5.238
r_mcangle_it3.309
r_mcangle_other3.309
r_scbond_other3.258
r_scbond_it3.257
r_mcbond_it2.209
r_mcbond_other2.209
r_angle_refined_deg1.656
r_angle_other_deg0.8
r_chiral_restr0.098
r_bond_refined_d0.017
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8046
Nucleic Acid Atoms
Solvent Atoms725
Heterogen Atoms198

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing