NDG: 2-acetamido-2-deoxy-alpha-D-glucopyranose
NDG is a Ligand Of Interest in 3D0I designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3D0I_NDG_A_616 | 63% | 70% | 0.123 | 0.919 | 0.49 | 0.64 | - | - | 4 | 0 | 100% | 1 |
3D0I_NDG_B_619 | 27% | 54% | 0.176 | 0.821 | 0.66 | 1.1 | - | 1 | 4 | 0 | 100% | 1 |
3D0I_NDG_B_617 | 12% | 52% | 0.296 | 0.824 | 0.57 | 1.27 | - | 2 | 0 | 0 | 100% | 1 |
3D0I_NDG_B_618 | 11% | 53% | 0.23 | 0.748 | 0.75 | 1.06 | - | 1 | 0 | 0 | 100% | 1 |
3D0I_NDG_B_616 | 6% | 68% | 0.347 | 0.791 | 0.63 | 0.6 | - | - | 0 | 0 | 100% | 1 |
3D0H_NDG_B_618 | 29% | 40% | 0.18 | 0.838 | 0.59 | 1.8 | - | 5 | 2 | 0 | 100% | 1 |
3D0G_NDG_A_616 | 26% | 55% | 0.246 | 0.886 | 0.49 | 1.23 | - | 3 | 0 | 0 | 100% | 1 |
4GVF_NDG_A_401 | 97% | 32% | 0.06 | 0.978 | 1.66 | 1.18 | 4 | 2 | 0 | 0 | 100% | 0.7 |
2UVO_NDG_B_1176 | 97% | 71% | 0.059 | 0.975 | 0.42 | 0.68 | - | - | 0 | 0 | 100% | 1 |
2ZUV_NDG_A_2001 | 97% | 50% | 0.066 | 0.978 | 0.54 | 1.38 | - | 2 | 0 | 0 | 100% | 1 |
5A3L_NDG_C_1237 | 96% | 58% | 0.066 | 0.974 | 0.44 | 1.15 | - | 2 | 0 | 0 | 100% | 0.5 |
8R3D_NDG_E_101 | 95% | 54% | 0.057 | 0.963 | 0.78 | 0.98 | 1 | 1 | 0 | 0 | 100% | 1 |