6CSX

Single particles Cryo-EM structure of AcrB D407A associated with lipid bilayer at 3.0 Angstrom


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure and Activity of Lipid Bilayer within a Membrane Protein Transporter

Qiu, W.Fu, Z.Xu, G.Grassucci, R.Zhang, Y.Frank, J.Hendrickson, W.Guo, Y.

(2018) Proc.Natl.Acad.Sci.Usa --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Multidrug efflux pump subunit AcrB
B, C, A
1057Escherichia coli (strain K12)Mutation(s): 1 
Gene Names: acrB (acrE)
Find proteins for P31224 (Escherichia coli (strain K12))
Go to UniProtKB:  P31224
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
D12
Query on D12

Download SDF File 
Download CCD File 
B
DODECANE
C12 H26
SNRUBQQJIBEYMU-UHFFFAOYSA-N
 Ligand Interaction
PTY
Query on PTY

Download SDF File 
Download CCD File 
A, B, C
PHOSPHATIDYLETHANOLAMINE
C40 H80 N O8 P
NJGIRBISCGPRPF-KXQOOQHDSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2018-03-21 
  • Released Date: 2018-12-05 
  • Deposition Author(s): Qiu, W., Fu, Z., Guo, Y.

Funding OrganizationLocationGrant Number
Other governmentUnited StatesStartup

Revision History 

  • Version 1.0: 2018-12-05
    Type: Initial release