6LTH

Structure of human BAF Base module


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of nucleosome-bound human BAF complex

Shuang, H.Zihan, W.Yuan, T.Zishuo, Y.Jiali, Y.Xinxin, W.Jie, L.Bijun, L.Yanhui, X.

(2020) Science --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transcription activator BRG1
I
1647Homo sapiensMutation(s): 0 
Gene Names: SMARCA4 (BAF190A, BRG1, SNF2B, SNF2L4)
EC: 3.6.4.-
Find proteins for P51532 (Homo sapiens)
Go to Gene View: SMARCA4
Go to UniProtKB:  P51532
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
AT-rich interactive domain-containing protein 1A
L
2285Homo sapiensMutation(s): 0 
Gene Names: ARID1A (BAF250, BAF250A, C1orf4, OSA1, SMARCF1)
Find proteins for O14497 (Homo sapiens)
Go to Gene View: ARID1A
Go to UniProtKB:  O14497
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
M
385Homo sapiensMutation(s): 0 
Gene Names: SMARCB1 (BAF47, INI1, SNF5L1)
Find proteins for Q12824 (Homo sapiens)
Go to Gene View: SMARCB1
Go to UniProtKB:  Q12824
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
SWI/SNF complex subunit SMARCC2
N, O
1214Homo sapiensMutation(s): 0 
Gene Names: SMARCC2 (BAF170)
Find proteins for Q8TAQ2 (Homo sapiens)
Go to Gene View: SMARCC2
Go to UniProtKB:  Q8TAQ2
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
P
515Homo sapiensMutation(s): 0 
Gene Names: SMARCD1 (BAF60A)
Find proteins for Q96GM5 (Homo sapiens)
Go to Gene View: SMARCD1
Go to UniProtKB:  Q96GM5
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Q
411Homo sapiensMutation(s): 0 
Gene Names: SMARCE1 (BAF57)
Find proteins for Q969G3 (Homo sapiens)
Go to Gene View: SMARCE1
Go to UniProtKB:  Q969G3
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
Zinc finger protein ubi-d4
R
391Homo sapiensMutation(s): 0 
Gene Names: DPF2 (BAF45D, REQ, UBID4)
Find proteins for Q92785 (Homo sapiens)
Go to Gene View: DPF2
Go to UniProtKB:  Q92785
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
L
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2020-02-12
    Type: Initial release