6VZS

Engineered TTLL6 mutant bound to gamma-elongation analog


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.66 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.218 
  • R-Value Observed: 0.220 

wwPDB Validation 3D Report Full Report



Literature

Engineered TTLL6 mutant bound to gamma-elongation analog

Mahalingan, K.K.Keenen, E.K.Strickland, M.Li, Y.Liu, Y.Ball, H.L.Tanner, M.E.Tjandra, N.Roll-Mecak, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Tubulin polyglutamylase TTLL6A, B, C, D453Mus musculusMutation(s): 3 
Gene Names: Ttll6
EC: 6
Find proteins for A4Q9E8 (Mus musculus)
Explore A4Q9E8 
Go to UniProtKB:  A4Q9E8
NIH Common Fund Data Resources
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
S3A
Query on S3A

Download CCD File 
A, B, C, D
(2~{S})-2-[[[(3~{R})-3-acetamido-4-oxidanyl-4-oxidanylidene-butyl]-phosphonooxy-phosphoryl]methyl]pentanedioic acid
C12 H21 N O12 P2
GAWJDXYZTLOFMC-UXDGFGRTSA-N
 Ligand Interaction
ADP
Query on ADP

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A, B, C, D
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
GOL
Query on GOL

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A, B, C, D
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
MG
Query on MG

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A, B, C, D
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.66 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.218 
  • R-Value Observed: 0.220 
  • Space Group: P 1 21 1
  • Diffraction Data DOI: 10.15785/SBGRID/802 SBGrid
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 74.738α = 90
b = 108.648β = 90.023
c = 170.888γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS)United StatesZIA NS 003163
National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS)United StatesZIA NS 003122

Revision History 

  • Version 1.0: 2020-08-12
    Type: Initial release