6ZFB

Structure of the B. subtilis RNA POLYMERASE in complex with HelD (dimer)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report



Literature

Structural basis of energy-status-dependent RNA polymerase recycling and hibernation

Pei, H.-P.Hilal, T.Chen, Z.A.Huang, Y.-H.Gao, Y.Said, N.Loll, B.Rappsilber, J.Belogurov, G.A.Artsimovitch, I.Wahl, M.C.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
DNA-directed RNA polymerase subunit deltaDd139Bacillus subtilisMutation(s): 0 
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  • Reference Sequence
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
RNA polymerase subunit omegaEe69Bacillus subtilisMutation(s): 0 
Find proteins for A0A410WI33 (Bacillus vallismortis)
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Go to UniProtKB:  A0A410WI33
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
DNA-directed RNA polymerase subunit alphaUVuv314Bacillus subtilisMutation(s): 0 
Gene Names: 
EC: 2.7.7.6
Find proteins for A0A063XB83 (Bacillus subtilis)
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Go to UniProtKB:  A0A063XB83
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
DNA-directed RNA polymerase subunit betaXx1193Bacillus subtilisMutation(s): 0 
Gene Names: 
EC: 2.7.7.6
Find proteins for A0A2J0WBQ0 (Bacillus subtilis)
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Go to UniProtKB:  A0A2J0WBQ0
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Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
DNA-directed RNA polymerase subunit beta'Yy1199Bacillus subtilisMutation(s): 0 
Gene Names: 
EC: 2.7.7.6
Find proteins for A0A063XB23 (Bacillus subtilis)
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Go to UniProtKB:  A0A063XB23
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Entity ID: 6
MoleculeChainsSequence LengthOrganismDetailsImage
DNA helicaseHh774Bacillus subtilisMutation(s): 0 
Gene Names: A3772_18055B4417_3167
EC: 3.6.4.12
Find proteins for A0A164TSE8 (Bacillus subtilis)
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Go to UniProtKB:  A0A164TSE8
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download CCD File 
Y, y
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)GermanyINST 335/590-1 FUGG
German Research Foundation (DFG)Germany973/C08
German Research Foundation (DFG)Germany433623608
German Research Foundation (DFG)Germany2473
Wellcome TrustUnited States103139
Wellcome TrustUnited States203149

Revision History 

  • Version 1.0: 2020-10-14
    Type: Initial release