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GDP

GUANOSINE-5'-DIPHOSPHATE

GDP is found in 980 entries

GDP in polymers: 25 entries. Examples include: 3ZD4 3OXJ 4Q9Q

GDP as free ligands, exist in 955 entries. Example includes: 5L3V 3GJ8 5JUP

Find related ligands: Stereoisomers Similar ligands Chemical Structure Search

View summary at Ligand Expo



Chemical Component Summary

NameGUANOSINE-5'-DIPHOSPHATE
Identifiers[(2R,3S,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate
FormulaC10 H15 N5 O11 P2
Molecular Weight443.20 g/mol
TypeRNA LINKING
Isomeric SMILESNc1nc2n(cnc2c(=O)[nH]1)[C@@H]1O[C@H](CO[P@@](O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O
InChIInChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKeyQGWNDRXFNXRZMB-UUOKFMHZSA-N

Chemical Details

Formal Charge0
Atom Count43
Chiral Atom Count4
Chiral AtomsC1' C2' C3' C4'
Bond Count45
Aromatic Bond Count5
Leaving Atomsn/a

Drug Info: DrugBank

DrugBank IDDB04315 Different stereochemistry
NameGuanosine-5'-Diphosphate
Groupsexperimental
DescriptionA guanine nucleotide containing two phosphate groups esterified to the sugar moiety. [PubChem]
CAS number146-91-8

Drug Targets

NameSequence SearchPharmacological ActionActions
GTPase DerMATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKT...unknown
Eukaryotic translation initiation factor 2 subunit 3MAGGEAGVTLGQPHLSRQDLTTLDVTKLTPLSHEVISRQATINIGTIGHV...unknown
Eukaryotic peptide chain release factor GTP-binding subunit ERF3AMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEM...unknown
Elongation factor GMAVKVEYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAA...unknown
Guanine nucleotide-binding protein G(i) subunit alpha-1MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIV...unknown
View More
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682