6P5R

Structure of T. brucei MERS1-GDP complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.227 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs in Trypanosoma brucei

Schumacher, M.A.

(2019) Rna --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Mitochondrial edited mRNA stability factor 1
A
410Trypanosoma bruceiMutation(s): 0 
Gene Names: MERS1
Find proteins for B6SBM0 (Trypanosoma brucei)
Go to UniProtKB:  B6SBM0
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GDP
Query on GDP

Download SDF File 
Download CCD File 
A
GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.227 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 90.815α = 90.00
b = 114.453β = 90.00
c = 77.964γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
AutoSolphasing
PDB_EXTRACTdata extraction
PHENIXrefinement
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2019-05-30 
  • Released Date: 2019-11-06 
  • Deposition Author(s): Schumacher, M.A.

Revision History 

  • Version 1.0: 2019-11-06
    Type: Initial release