1FTS
SIGNAL RECOGNITION PARTICLE RECEPTOR FROM E. COLI
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1ftsa1 | All alpha proteins | Four-helical up-and-down bundle | Domain of the SRP/SRP receptor G-proteins | Domain of the SRP/SRP receptor G-proteins | Signal recognition particle receptor, FtsY | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
A | d1ftsa2 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | Nitrogenase iron protein-like | GTPase domain of the signal recognition particle receptor FtsY | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SRP54_N | e1ftsA1 | A: alpha bundles | X: Domain of the SRP/SRP receptor G proteins-like | H: Domain of the SRP/SRP receptor G-proteins (From Topology) | T: Domain of the SRP/SRP receptor G-proteins | F: SRP54_N | ECOD (1.6) |
A | SRP54 | e1ftsA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: SRP54 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.140 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | SRP54, nucleotide-binding domain | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00448 | SRP54-type protein, GTPase domain (SRP54) | SRP54-type protein, GTPase domain | This family includes relatives of the G-domain of the SRP54 family of proteins. | Domain | |
PF02881 | SRP54-type protein, helical bundle domain (SRP54_N) | SRP54-type protein, helical bundle domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004390 | Signal-recognition particle receptor FtsY | Family | |
IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain | Domain | |
IPR036225 | SRP/SRP receptor, N-terminal | Homologous Superfamily | |
IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily | Homologous Superfamily | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR013822 | Signal recognition particle SRP54, helical bundle | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |