1OJT
STRUCTURE OF DIHYDROLIPOAMIDE DEHYDROGENASE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1ojta2 | Alpha and beta proteins (a/b) | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | FAD/NAD-linked reductases, N-terminal and central domains | Dihydrolipoamide dehydrogenase, middle domain | (Neisseria meningitidis ) [TaxId: 487 ], | SCOPe (2.08) |
A | d1ojta1 | Alpha and beta proteins (a/b) | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | FAD/NAD-linked reductases, N-terminal and central domains | Dihydrolipoamide dehydrogenase, N- and C-terminal domain | (Neisseria meningitidis ) [TaxId: 487 ], | SCOPe (2.08) |
A | d1ojta3 | Alpha and beta proteins (a+b) | CO dehydrogenase flavoprotein C-domain-like | FAD/NAD-linked reductases, dimerisation (C-terminal) domain | FAD/NAD-linked reductases, dimerisation (C-terminal) domain | Dihydrolipoamide dehydrogenase | (Neisseria meningitidis ) [TaxId: 487 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Glutathione reductase-like | 8057743 | 4000121 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Thioredoxin reductase-like | 8057744 | 3000050 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GSR C-terminal domain-like | 8057745 | 3000028 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pyr_redox_dim | e1ojtA1 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: FAD/NAD-linked reduatases, dimerisation (C-terminal) domain (From Topology) | T: FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | F: Pyr_redox_dim | ECOD (1.6) |
A | Pyr_redox_2_1 | e1ojtA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: Pyr_redox_2_1 | ECOD (1.6) |
A | Pyr_redox_2 | e1ojtA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: Pyr_redox_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.50.50.60 | Alpha Beta | 3-Layer(bba) Sandwich | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | CATH (4.3.0) |
A | 3.30.390.30 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07992 | Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox_2) | Pyridine nucleotide-disulphide oxidoreductase | This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain. | Domain | |
PF02852 | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain (Pyr_redox_dim) | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004099 | Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain | Domain | |
IPR006258 | Dihydrolipoamide dehydrogenase | Family | |
IPR001100 | Pyridine nucleotide-disulphide oxidoreductase, class I | Family | |
IPR016156 | FAD/NAD-linked reductase, dimerisation domain superfamily | Homologous Superfamily | |
IPR036188 | FAD/NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR023753 | FAD/NAD(P)-binding domain | Domain | |
IPR050151 | Class-I pyridine nucleotide-disulfide oxidoreductase | Family | |
IPR012999 | Pyridine nucleotide-disulphide oxidoreductase, class I, active site | Active Site | |
IPR011053 | Single hybrid motif | Homologous Superfamily | |
IPR003016 | 2-oxo acid dehydrogenase, lipoyl-binding site | Binding Site | |
IPR000089 | Biotin/lipoyl attachment | Domain |