1PRT
THE CRYSTAL STRUCTURE OF PERTUSSIS TOXIN
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | ADP-ribosylating toxins | 8024625 | 4002404 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ADP-ribosylation | 8037004 | 3001208 | SCOP2 (2022-06-29) |
G | SCOP2B Superfamily | ADP-ribosylation | 8037004 | 3001208 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Aerolysin/Pertussis toxin (APT) domain | 8024744 | 4002495 | SCOP2 (2022-06-29) |
B | SCOP2 Family | Bacterial AB5 toxins, B-subunits | 8029475 | 4001827 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | C-type lectin-like | 8037123 | 3001261 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Bacterial enterotoxins | 8041854 | 3000434 | SCOP2 (2022-06-29) |
H | SCOP2B Superfamily | Bacterial enterotoxins | 8041854 | 3000434 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | C-type lectin-like | 8037123 | 3001261 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Bacterial AB5 toxins, B-subunits | 8029483 | 4001827 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Bacterial enterotoxins | 8041862 | 3000434 | SCOP2 (2022-06-29) |
E | SCOP2B Superfamily | Bacterial enterotoxins | 8041862 | 3000434 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Bacterial enterotoxins | 8041862 | 3000434 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Bacterial enterotoxins | 8041862 | 3000434 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Bacterial enterotoxins | 8041863 | 3000434 | SCOP2B (2022-06-29) |
F | SCOP2 Family | Bacterial AB5 toxins, B-subunits | 8029484 | 4001827 | SCOP2 (2022-06-29) |
F | SCOP2 Superfamily | Bacterial enterotoxins | 8041863 | 3000434 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pertussis_S1 | e1prtA1 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: Pertussis_S1 | ECOD (1.6) |
G | Pertussis_S1 | e1prtG1 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: Pertussis_S1 | ECOD (1.6) |
B | Pertussis_S2S3 | e1prtB1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertussis_S2S3 | ECOD (1.6) |
B | APT | e1prtB2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: APT | ECOD (1.6) |
H | Pertussis_S2S3 | e1prtH1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertussis_S2S3 | ECOD (1.6) |
H | APT | e1prtH2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: APT | ECOD (1.6) |
C | Pertussis_S2S3 | e1prtC1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertussis_S2S3 | ECOD (1.6) |
C | APT | e1prtC2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: APT | ECOD (1.6) |
I | Pertussis_S2S3 | e1prtI1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertussis_S2S3 | ECOD (1.6) |
I | APT | e1prtI2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: APT | ECOD (1.6) |
D | Pertus-S4-tox | e1prtD1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertus-S4-tox | ECOD (1.6) |
E | Pertus-S4-tox | e1prtE1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertus-S4-tox | ECOD (1.6) |
J | Pertus-S4-tox | e1prtJ1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertus-S4-tox | ECOD (1.6) |
K | Pertus-S4-tox | e1prtK1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertus-S4-tox | ECOD (1.6) |
L | Pertus-S5-tox | e1prtL1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertus-S5-tox | ECOD (1.6) |
F | Pertus-S5-tox | e1prtF1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: Pertus-S5-tox | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02917 | Pertussis toxin, subunit 1 (Pertussis_S1) | Pertussis toxin, subunit 1 | - | Domain | |
PF03440 | Aerolysin/Pertussis toxin (APT) domain (APT) | Aerolysin/Pertussis toxin (APT) domain | This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold. | Domain | |
PF02918 | Pertussis toxin, subunit 2 and 3, C-terminal domain (Pertussis_S2S3) | Pertussis toxin, subunit 2 and 3, C-terminal domain | - | Domain | |
PF03440 | Aerolysin/Pertussis toxin (APT) domain (APT) | Aerolysin/Pertussis toxin (APT) domain | This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold. | Domain | |
PF02918 | Pertussis toxin, subunit 2 and 3, C-terminal domain (Pertussis_S2S3) | Pertussis toxin, subunit 2 and 3, C-terminal domain | - | Domain | |
PF09275 | Pertussis toxin S4 subunit (Pertus-S4-tox) | Pertussis toxin S4 subunit | Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1]. | Domain | |
PF09276 | Pertussis toxin S5 subunit (Pertus-S5-tox) | Pertussis toxin S5 subunit | Members of this family of Bordetella pertussis toxins adopt a structure consisting of an OB fold, with a closed or partly opened beta-barrel in a Greek-key topology [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
PERTUSSIS TOXIN (SUBUNIT S1) |
| - | ||
PERTUSSIS TOXIN (SUBUNIT S2) | - | |||
PERTUSSIS TOXIN (SUBUNIT S3) | - | |||
PERTUSSIS TOXIN (SUBUNIT S4) | - | |||
PERTUSSIS TOXIN (SUBUNIT S5) | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003898 | Bordetella pertussis toxin A | Family | |
IPR005138 | Aerolysin/Pertussis toxin domain | Domain | |
IPR016187 | C-type lectin fold | Homologous Superfamily | |
IPR037015 | Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily | Homologous Superfamily | |
IPR008992 | Enterotoxin | Homologous Superfamily | |
IPR003899 | Bordetella pertussis toxin B | Family | |
IPR020063 | Bordetella pertussis toxin B, subunit 2/3, C-terminal | Domain | |
IPR005138 | Aerolysin/Pertussis toxin domain | Domain | |
IPR016187 | C-type lectin fold | Homologous Superfamily | |
IPR037015 | Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily | Homologous Superfamily | |
IPR008992 | Enterotoxin | Homologous Superfamily | |
IPR003899 | Bordetella pertussis toxin B | Family | |
IPR020063 | Bordetella pertussis toxin B, subunit 2/3, C-terminal | Domain | |
IPR015355 | Pertussis toxin, subunit S4 | Family | |
IPR008992 | Enterotoxin | Homologous Superfamily | |
IPR015356 | Pertussis toxin, subunit S5 | Family | |
IPR008992 | Enterotoxin | Homologous Superfamily |