1T2W | pdb_00001t2w

Crystal Structure of Sortase A in Complex with a LPETG peptide

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1t2wa_	All beta proteins	Sortase	Sortase	Sortase	Sortase A	(Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)
B	d1t2wb_	All beta proteins	Sortase	Sortase	Sortase	Sortase A	(Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)
C	d1t2wc_	All beta proteins	Sortase	Sortase	Sortase	Sortase A	(Staphylococcus aureus ) [TaxId: 1280 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Sortase	8039896	3000481	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Sortase	8039896	3000481	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Sortase	8039896	3000481	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Sortase	e1t2wA1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
B	Sortase	e1t2wB1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
C	Sortase	e1t2wC1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
B	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
C	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF04203	Sortase domain (Sortase)	Sortase domain	The founder member of this family is S. aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Class A sortase SrtA	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding manganese ion binding transition metal ion binding calcium ion binding cysteine-type peptidase activity peptidase activity calcium-dependent cysteine-type endopeptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding manganese ion binding transition metal ion binding calcium ion binding cysteine-type peptidase activity peptidase activity calcium-dependent cysteine-type endopeptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity catalytic activity endopeptidase activity peptide binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	-
D	Peptide LEU-PRO-GLU-THR-GLY	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR023365	Sortase domain superfamily	Homologous Superfamily
A, B, C	IPR042007	Sortase A	Family
A, B, C	IPR005754	Sortase family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.