2FGS

Crystal structure of Campylobacter jejuni YCEI protein, structural genomics

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyYceI-like 8075167 4000920 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyYceI-like 8075168 3001989 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AYceIe2fgsA1 A: beta barrelsX: Lipocalins/StreptavidinH: Hypothetical protein TT1927B (From Topology)T: Hypothetical protein TT1927BF: YceIECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.128.110 Mainly Beta Beta Barrel Lipocalin Lipid/polyisoprenoid-binding, YceI-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04264YceI-like domain (YceI)YceI-like domainE. coli YceI is a base-induced periplasmic protein [1]. The recent structure of a member of this family shows that it binds to poly-isoprenoid [2]. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lip ...E. coli YceI is a base-induced periplasmic protein [1]. The recent structure of a member of this family shows that it binds to poly-isoprenoid [2]. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036761Lipid/polyisoprenoid-binding, YceI-like superfamilyHomologous Superfamily
IPR007372Lipid/polyisoprenoid-binding, YceI-likeDomain