2HWK
Crystal Structure of Venezuelan Equine Encephalitis Alphavirus nsP2 Protease Domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_C9 | e2hwkA1 | A: a+b complex topology | X: Cysteine proteinases-like | H: Cysteine proteinases (From Topology) | T: Cysteine proteinases | F: Peptidase_C9 | ECOD (1.6) |
A | FtsJ_1 | e2hwkA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: FtsJ_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.70.110 | Alpha Beta | Alpha-Beta Complex | Cathepsin B | Chain A | CATH (4.3.0) |
A | 3.40.50.150 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Vaccinia Virus protein VP39 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01707 | Peptidase family C9 (Peptidase_C9) | Peptidase family C9 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002589 | Macro domain | Domain | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR002620 | Alphavirus nsp2 protease domain | Domain | |
IPR002588 | Alphavirus-like methyltransferase domain | Domain | |
IPR043472 | Macro domain-like | Homologous Superfamily | |
IPR044936 | Alphavirus nsP2 protease domain superfamily | Homologous Superfamily | |
IPR049329 | Tomato mosaic virus helicase, N-terminal domain | Domain | |
IPR044371 | Non-structural protein 3, X-domain-like | Domain | |
IPR027351 | (+) RNA virus helicase core domain | Domain | |
IPR048891 | Non-structural protein 3, zinc-binding domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |