2IXI
RmlC P aeruginosa with dTDP-xylose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d2ixib_ | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | dTDP-sugar isomerase | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
A | d2ixia_ | All beta proteins | Double-stranded beta-helix | RmlC-like cupins | dTDP-sugar isomerase | dTDP-4-dehydrorhamnose 3,5-epimerase RmlC | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | dTDP_sugar_isom | e2ixiB1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: dTDP_sugar_isom | ECOD (1.6) |
A | dTDP_sugar_isom | e2ixiA1 | A: beta sandwiches | X: jelly-roll | H: Double-stranded beta-helix (From Topology) | T: Double-stranded beta-helix | F: dTDP_sugar_isom | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00908 | dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP_sugar_isom) | dTDP-4-dehydrorhamnose 3,5-epimerase | This family catalyse the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000888 | dTDP-4-dehydrorhamnose 3,5-epimerase-like | Family | |
IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |