2W4I
Crystal structure of Helicobacter pylori glutamate racemase in complex with D-Glutamate and an inhibitor
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Asp_Glu_race_C | e2w4iA4 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_C | ECOD (1.6) |
A | Asp_Glu_race_N | e2w4iA3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_N | ECOD (1.6) |
B | Asp_Glu_race_C | e2w4iB4 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_C | ECOD (1.6) |
B | Asp_Glu_race_N | e2w4iB3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_N | ECOD (1.6) |
C [auth E] | Asp_Glu_race_C | e2w4iE4 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_C | ECOD (1.6) |
C [auth E] | Asp_Glu_race_N | e2w4iE3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_N | ECOD (1.6) |
D [auth F] | Asp_Glu_race_C | e2w4iF4 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_C | ECOD (1.6) |
D [auth F] | Asp_Glu_race_N | e2w4iF3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: ATC-like | F: Asp_Glu_race_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1860 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 3.40.50.1860 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C [auth E] | 3.40.50.1860 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
D [auth F] | 3.40.50.1860 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, C [auth E], D [auth F] | PF01177 | Asp/Glu/Hydantoin racemase (Asp_Glu_race) | Asp/Glu/Hydantoin racemase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, C [auth E], D [auth F] | IPR033134 | Asp/Glu racemase, active site 2 | Active Site |
A, B, C [auth E], D [auth F] | IPR018187 | Asp/Glu racemase, active site 1 | Active Site |
A, B, C [auth E], D [auth F] | IPR001920 | Asp/Glu racemase | Homologous Superfamily |
A, B, C [auth E], D [auth F] | IPR015942 | Asp/Glu/hydantoin racemase | Family |
A, B, C [auth E], D [auth F] | IPR004391 | Glutamate racemase | Family |