3E9K

Crystal structure of Homo sapiens kynureninase-3-hydroxyhippuric acid inhibitor complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Bna5	e3e9kA1	A: a+b two layers	X: C-terminal domain in some PLP-dependent transferases (From Topology)	H: C-terminal domain in some PLP-dependent transferases (From Topology)	T: C-terminal domain in some PLP-dependent transferases	F: Bna5	ECOD (1.6)
A	Aminotran_5_N	e3e9kA2	A: a/b three-layered sandwiches	X: PLP-dependent transferases (From Topology)	H: PLP-dependent transferases (From Topology)	T: PLP-dependent transferases	F: Aminotran_5_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.90.1150.10	Alpha Beta	Alpha-Beta Complex	Aspartate Aminotransferase, domain 1	Aspartate Aminotransferase, domain 1	CATH (4.3.0)
A	3.40.640.10	Alpha Beta	3-Layer(aba) Sandwich	Aspartate Aminotransferase	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF22580	Kynureninase C-terminal domain (KYNU_C)	Kynureninase C-terminal domain	This entry represents de C-terminal domain of kynureninase [1-5], a member of a large family of catalytically diverse but structurally homologous pyridoxal 5'-phosphate (PLP) dependent enzymes. The Homo sapiens and other eukaryotic constitutive kynur ...	This entry represents de C-terminal domain of kynureninase [1-5], a member of a large family of catalytically diverse but structurally homologous pyridoxal 5'-phosphate (PLP) dependent enzymes. The Homo sapiens and other eukaryotic constitutive kynureninases preferentially catalyse the hydrolytic cleavage of 3-hydroxy-l-kynurenine to produce 3-hydroxyanthranilate and l-alanine, while l-kynurenine is the substrate of many prokaryotic inducible kynureninases [1-5]..	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Kynureninase	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding organic cyclic compound binding anion binding heterocyclic compound binding small molecule binding hydrolase activity, acting on acid carbon-carbon bonds identical protein binding protein binding binding protein homodimerization activity protein dimerization activity vitamin binding vitamin B6 binding pyridoxal phosphate binding ion binding organic cyclic compound binding anion binding heterocyclic compound binding small molecule binding hydrolase activity, acting on acid carbon-carbon bonds kynureninase activity hydrolase activity hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances catalytic activity	biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response response to type II interferon response to cytokine defense response to symbiont response to external stimulus response to biotic stimulus response to peptide response to chemical immune system process defense response to other organism response to stress biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response response to type II interferon response to cytokine defense response to symbiont response to external stimulus response to biotic stimulus response to peptide response to chemical immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus response to nutrient levels response to nutrient response to oxygen-containing compound response to vitamin B6 response to nitrogen compound response to vitamin response to organic cyclic compound catabolic process oxoacid metabolic process ketone metabolic process aromatic amino acid family catabolic process indole-containing compound metabolic process amino acid metabolic process organic acid catabolic process organic acid metabolic process alpha-amino acid metabolic process cellular catabolic process non-proteinogenic amino acid metabolic process carboxylic acid catabolic process indolalkylamine metabolic process small molecule metabolic process amino acid catabolic process aromatic amino acid metabolic process benzene-containing compound metabolic process carboxylic acid metabolic process primary metabolic process amine metabolic process kynurenine metabolic process tryptophan catabolic process to kynurenine alpha-amino acid catabolic process indole-containing compound catabolic process tryptophan catabolic process metabolic process cellular process small molecule catabolic process biogenic amine metabolic process quinolinate metabolic process small molecule biosynthetic process dicarboxylic acid metabolic process pyridine-containing compound biosynthetic process organic acid biosynthetic process carboxylic acid biosynthetic process quinolinate biosynthetic process biosynthetic process pyridine-containing compound metabolic process dicarboxylic acid biosynthetic process anthranilate metabolic process monocarboxylic acid metabolic process L-kynurenine metabolic process ketone catabolic process L-kynurenine catabolic process non-proteinogenic amino acid catabolic process L-amino acid catabolic process L-amino acid metabolic process nucleotide biosynthetic process NAD metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process 'de novo' NAD biosynthetic process phosphate-containing compound metabolic process phosphorus metabolic process pyridine nucleotide metabolic process NAD biosynthetic process pyridine nucleotide biosynthetic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process nucleotide metabolic process nucleobase-containing compound biosynthetic process tryptophan metabolic process purine-containing compound metabolic process nicotinamide nucleotide biosynthetic process proteinogenic amino acid metabolic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process 'de novo' NAD biosynthetic process from tryptophan purine nucleotide biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015421	Pyridoxal phosphate-dependent transferase, major domain	Homologous Superfamily
A	IPR015422	Pyridoxal phosphate-dependent transferase, small domain	Homologous Superfamily
A	IPR010111	Kynureninase	Family
A	IPR015424	Pyridoxal phosphate-dependent transferase	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q16719	encephalopathy due to hydroxykynureninuria Inflammation lymphoplasmacytic lymphoma malignant glioma MALT lymphoma ovarian cancer adrenal cortex carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia brain disease sinusitis Crohn disease ulcerative colitis lung cancer major depressive disorder malignant mesothelioma encephalopathy due to hydroxykynureninuria Inflammation lymphoplasmacytic lymphoma malignant glioma MALT lymphoma ovarian cancer adrenal cortex carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia brain disease sinusitis Crohn disease ulcerative colitis lung cancer major depressive disorder malignant mesothelioma neurodegenerative disease pancreatic ductal adenocarcinoma allergic rhinitis pilocytic astrocytoma breast carcinoma Sjogren syndrome cutaneous lupus erythematosus vertebral, cardiac, renal, and limb defects syndrome 2 glioblastoma invasive ductal breast carcinoma lung carcinoma malignant ependymoma malignant pancreatic neoplasm pancreatic intraductal papillary-mucinous neoplasm atopic eczema psoriasis congenital anomaly of kidney and urinary tract tuberculosis cystic fibrosis ductal breast carcinoma in situ IgA glomerulonephritis

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	CSX	Parent Component: CYS RESID: AA0451 PSI-MOD : 2'-(S-L-cysteinyl)-6'-hydroxy-L-tryptophan sulfoxide MOD:01380

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.