3PMK
Crystal structure of the Vesicular Stomatitis Virus RNA free nucleoprotein/phosphoprotein complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8101381 | 3001763 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8101381 | 3001763 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Rhabdovirus nucleocapsid protein | 8101380 | 4001522 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Rhabdovirus nucleoprotein-like | 8101381 | 3001763 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8101381 | 3001763 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8101381 | 3001763 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00945 | e3pmkA1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: PF00945 | ECOD (1.6) |
B | PF00945 | e3pmkB1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: PF00945 | ECOD (1.6) |
C | PF00945 | e3pmkC1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: PF00945 | ECOD (1.6) |
D | PF00945 | e3pmkD1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: PF00945 | ECOD (1.6) |
E | PF00945 | e3pmkE1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: PF00945 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Nucleocapsid protein | - | |||
F [auth N], G [auth O], H [auth P], I [auth Q], J [auth R] | Phosphoprotein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR035961 | Rhabdovirus nucleoprotein-like | Homologous Superfamily | |
IPR000448 | Rhabdovirus nucleocapsid | Domain | |
IPR023330 | Rhabdovirus nucleocapsid, N-terminal | Homologous Superfamily | |
IPR023331 | Rhabdovirus nucleocapsid, C-terminal | Homologous Superfamily | |
F [auth N], G [auth O], H [auth P], I [auth Q], J [auth R] | IPR037263 | Phosphoprotein, central domain | Homologous Superfamily |
F [auth N], G [auth O], H [auth P], I [auth Q], J [auth R] | IPR043036 | Phosphoprotein, C-terminal domain, viral | Homologous Superfamily |
F [auth N], G [auth O], H [auth P], I [auth Q], J [auth R] | IPR048220 | Phosphoprotein, C-terminal domain, vesiculovirus | Domain |