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3QT9
Analysis of a new family of widely distributed metal-independent alpha mannosidases provides unique insight into the processing of N-linked glycans, Clostridium perfringens CPE0426 complexed with alpha-1,6-linked 1-thio-alpha-mannobiose
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification
SCOP-e Database Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
Provenance Source (Version)
A
d3qt9a_
All alpha proteins
alpha/alpha toroid
Six-hairpin glycosidases
CPF0428-like
Hypothetical protein CPF0428
(
Clostridium perfringens
) [TaxId:
1502
],
SCOPe (2.08)
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2B Superfamily
Six-hairpin glycosidases
8034907
3000970
SCOP2B (2022-06-29)
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
Glyco_hydro_125
e3qt9A1
A: alpha superhelices
X: Repetitive alpha hairpins
H: alpha/alpha toroid (From Topology)
T: alpha/alpha toroid
F: Glyco_hydro_125
ECOD (1.6)
Domain Annotation: CATH
CATH Database Homepage
Chain
Domain
Class
Architecture
Topology
Homology
Provenance Source (Version)
A
1.50.10.10
Mainly Alpha
Alpha/alpha barrel
Glycosyltransferase
CATH (4.3.0)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF06824
Metal-independent alpha-mannosidase (GH125) (Glyco_hydro_125)
Metal-independent alpha-mannosidase (GH125)
-
Repeat
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Putative uncharacterized protein CPE0426
cation binding
ion binding
binding
metal ion binding
small molecule binding
carbohydrate metabolic process
primary metabolic process
metabolic process
-
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR012341
Six-hairpin glycosidase-like superfamily
Homologous Superfamily
A
IPR008313
Metal-independent alpha-mannosidase
Family
A
IPR008928
Six-hairpin glycosidase superfamily
Homologous Superfamily
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