3WRB
Crystal structure of the anaerobic H124F DESb-Gallate complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LigA | e3wrbA2 | A: alpha arrays | X: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | H: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | T: LigA subunit of an aromatic-ring-opening dioxygenase LigAB | F: LigA | ECOD (1.6) |
A | LigB | e3wrbA1 | A: a/b three-layered sandwiches | X: LigB-like (From Topology) | H: LigB-like (From Topology) | T: LigB-like | F: LigB | ECOD (1.6) |
B | LigA | e3wrbB2 | A: alpha arrays | X: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | H: LigA subunit of an aromatic-ring-opening dioxygenase LigAB (From Topology) | T: LigA subunit of an aromatic-ring-opening dioxygenase LigAB | F: LigA | ECOD (1.6) |
B | LigB | e3wrbB1 | A: a/b three-layered sandwiches | X: LigB-like (From Topology) | H: LigB-like (From Topology) | T: LigB-like | F: LigB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.830.10 | Alpha Beta | 3-Layer(aba) Sandwich | Protocatechuate 4,5-dioxygenase | Chain B | CATH (4.3.0) |
A | 1.10.700.10 | Mainly Alpha | Orthogonal Bundle | Protocatechuate 4,5-dioxygenase | Chain A | CATH (4.3.0) |
B | 3.40.830.10 | Alpha Beta | 3-Layer(aba) Sandwich | Protocatechuate 4,5-dioxygenase | Chain B | CATH (4.3.0) |
B | 1.10.700.10 | Mainly Alpha | Orthogonal Bundle | Protocatechuate 4,5-dioxygenase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02900 | Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) | Catalytic LigB subunit of aromatic ring-opening dioxygenase | - | Domain | |
PF07746 | Aromatic-ring-opening dioxygenase LigAB, LigA subunit (LigA) | Aromatic-ring-opening dioxygenase LigAB, LigA subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Gallate dioxygenase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011986 | Extradiol ring-cleavage dioxygenase LigAB, LigA subunit | Domain | |
IPR034940 | Gallate dioxygenase, C-terminal | Domain | |
IPR036622 | Dioxygenase LigAB, LigA subunit superfamily | Homologous Superfamily | |
IPR034939 | Gallate dioxygenase, N-terminal | Domain | |
IPR004183 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | Domain |