Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4h02a1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Ad4h02a2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Bd4h02b1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Bd4h02b2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Ed4h02e1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Ed4h02e2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Gd4h02g1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Gd4h02g2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Hd4h02h1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Hd4h02h2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Cd4h02c1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Cd4h02c2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Dd4h02d1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Dd4h02d2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Fd4h02f1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)
Fd4h02f2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Plasmodium falciparum 3D7 ) [TaxId: 36329 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AtRNA_anti-codone4h02A6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
AtRNA-synt_2e4h02A5 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
BtRNA_anti-codone4h02B4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
BtRNA-synt_2e4h02B3 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
EtRNA_anti-codone4h02E6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
EtRNA-synt_2e4h02E5 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
GtRNA_anti-codone4h02G6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
GtRNA-synt_2e4h02G5 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
HtRNA_anti-codone4h02H6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
HtRNA-synt_2e4h02H5 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
CtRNA_anti-codone4h02C6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
CtRNA-synt_2e4h02C5 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
DtRNA_anti-codone4h02D6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
DtRNA-synt_2e4h02D5 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
FtRNA_anti-codone4h02F6 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
FtRNA-synt_2e4h02F5 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
A3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
B2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
B3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
E2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
E3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
G2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
G3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
H2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
H3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
C2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
C3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
D2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
D3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)
F2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
F3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00152tRNA synthetases class II (D, K and N) (tRNA-synt_2)tRNA synthetases class II (D, K and N)- Domain
A, B, C, D, E
PF01336OB-fold nucleic acid binding domain (tRNA_anti-codon)OB-fold nucleic acid binding domainThis family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an a ...This family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an amino acid to the appropriate tRNA molecule EC:6.1.1.-. This family also includes part of RecG helicase involved in DNA repair. Replication factor A is a hetero-trimeric complex, that contains a subunit in this family [2,3]. This domain is also found at the C-terminus of bacterial DNA polymerase III alpha chain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Lysyl-tRNA synthetase