4HL9 | pdb_00004hl9

Crystal structure of antibiotic biosynthesis monooxygenase

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PA3566-like	8067825	4002653	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Dimeric alpha+beta barrel	8067826	3000089	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ABM	e4hl9A1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
B	ABM	e4hl9B1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
C	ABM	e4hl9C1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
D	ABM	e4hl9D1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
E	ABM	e4hl9E1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
F	ABM	e4hl9F1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
G	ABM	e4hl9G1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
H	ABM	e4hl9H1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)
I	ABM	e4hl9I1	A: a+b two layers	X: Alpha-beta plaits	H: Dimeric alpha+beta barrel (From Topology)	T: Dimeric alpha+beta barrel	F: ABM	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
B	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
C	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
D	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
E	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
F	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
G	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
H	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
I	3.30.70.100	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I	PF03992	Antibiotic biosynthesis monooxygenase (ABM)	Antibiotic biosynthesis monooxygenase	This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 (Swiss:Q9X9W3) is suggestive that the other proteins function as mult ...	This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 (Swiss:Q9X9W3) is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I	Antibiotic biosynthesis monooxygenase	monooxygenase activity oxidoreductase activity catalytic activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR007138	Antibiotic biosynthesis monooxygenase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR050744	AI-2 Signaling Cycle Isomerase LsrG	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I	IPR011008	Dimeric alpha-beta barrel	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D, E A, B, C, D, E, F, G, H, I	CSO	Parent Component: CYS RESID: AA0205 PSI-MOD : L-cysteine sulfenic acid MOD:00210
A, B, C, D, E A, B, C, D, E, F, G, H, I	MSE	Parent Component: MET RESID: AA0205

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.