Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4juna1 All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Ad4juna2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Cd4junc1 All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Cd4junc2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Ed4june1 All beta proteins Viral protein domain Viral protein domain Influenza hemagglutinin headpiece Hemagglutinin (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Ed4june2 Artifacts Tags Tags Tags N-terminal Tags (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Bd4junb_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) automated matches (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Dd4jund_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) automated matches (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)
Fd4junf_ Coiled coil proteins Stalk segment of viral fusion proteins Influenza hemagglutinin (stalk) Influenza hemagglutinin (stalk) automated matches (Influenza A virus (A/duck/Guangxi/2396/2004(H5N1)) ) [TaxId: 365085 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyInfluenza hemagglutinin headpiece 8087759 4002506 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyInfluenza hemagglutinin domain-like 8087760 3001342 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087760 3001342 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyInfluenza hemagglutinin domain-like 8087760 3001342 SCOP2B (2022-06-29)
BSCOP2 FamilyInfluenza hemagglutinin (stalk) 8087935 4003840 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyInfluenza hemagglutinin (stalk) 8087936 3001616 SCOP2 (2022-06-29)
DSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8087936 3001616 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyInfluenza hemagglutinin (stalk) 8087936 3001616 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHemagglutinin_1ste4junA1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
CHemagglutinin_1ste4junC1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
EHemagglutinin_1ste4junE1 A: beta sandwichesX: jelly-rollH: Viral protein domain (From Topology)T: Viral protein domainF: Hemagglutinin_1stECOD (1.6)
BHemagglutinin_2nde4junB1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
DHemagglutinin_2nde4junD1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)
FHemagglutinin_2nde4junF1 A: alpha bundlesX: Hemagglutinin HA2 chain (From Topology)H: Hemagglutinin HA2 chain (From Topology)T: Hemagglutinin HA2 chainF: Hemagglutinin_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family
B, D, F
PF00509Haemagglutinin (Hemagglutinin)Haemagglutinin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E
Hemagglutinin HA1
B, D, F
Hemagglutinin HA2