4YLU
X-ray structure of MERS-CoV nsp5 protease bound with a non-covalent inhibitor
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4ylua_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | automated matches | automated matches | (Middle East respiratory syndrome-related coronavirus ) [TaxId: 1335626 ], | SCOPe (2.08) |
B | d4ylub_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | automated matches | automated matches | (Middle East respiratory syndrome-related coronavirus ) [TaxId: 1335626 ], | SCOPe (2.08) |
C | d4yluc_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | automated matches | automated matches | (Middle East respiratory syndrome-related coronavirus ) [TaxId: 1335626 ], | SCOPe (2.08) |
D | d4ylud_ | All beta proteins | Trypsin-like serine proteases | Trypsin-like serine proteases | automated matches | automated matches | (Middle East respiratory syndrome-related coronavirus ) [TaxId: 1335626 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trypsin-like serine proteases | 8076473 | 3000114 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Viral cysteine protease of trypsin fold (M)Pro-like | 8076472 | 4002259 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Trypsin-like serine proteases | 8076473 | 3000114 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Trypsin-like serine proteases | 8076473 | 3000114 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Trypsin-like serine proteases | 8076473 | 3000114 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05409 | e4yluA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05409 | ECOD (1.6) |
A | PF05409 | e4yluA1 | A: alpha arrays | X: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | H: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | T: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain | F: PF05409 | ECOD (1.6) |
B | PF05409 | e4yluB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05409 | ECOD (1.6) |
B | PF05409 | e4yluB2 | A: alpha arrays | X: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | H: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | T: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain | F: PF05409 | ECOD (1.6) |
C | PF05409 | e4yluC2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05409 | ECOD (1.6) |
C | PF05409 | e4yluC1 | A: alpha arrays | X: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | H: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | T: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain | F: PF05409 | ECOD (1.6) |
D | PF05409 | e4yluD2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PF05409 | ECOD (1.6) |
D | PF05409 | e4yluD1 | A: alpha arrays | X: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | H: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain (From Topology) | T: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain | F: PF05409 | ECOD (1.6) |